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The map label for this gene is yvcS [H]

Identifier: 56964994

GI number: 56964994

Start: 3352801

End: 3354702

Strand: Direct

Name: yvcS [H]

Synonym: ABC3230

Alternate gene names: 56964994

Gene position: 3352801-3354702 (Clockwise)

Preceding gene: 56964993

Following gene: 56964996

Centisome position: 77.9

GC content: 43.8

Gene sequence:

>1902_bases
ATGAATCTACGCACACTCGCCCGTAGAAACATTACTGGCCACGCCCAACGCTATGCTGCTTATTTTCTAAGTTGCGTGTT
CACCGTCATGATCTTTTTTATCTATGCTCAGTTTATTTTTCACCCAGACGTCGCCGAGGAAAGCATGCACCAGGTCGTCA
AAAACGGCATGGTGGCAGCACAAGTAATCATTGTCTTATTTTCGATCTTTTTTATCGCCTATTCGAACAATGTCTTTTTG
CAAGTTCGCTCACAGGAATTTGGGCTTTTAACGCTTTTTGGCATGAATAGAAGCCAGTTGCGCTCTCTTGTCTATTATGA
GCAAACGATTATCTCGATTGTTGCCATCATTTGCGGACTTCTGCTTGGCACGCTTTTCTCGAAATTATTTTTGATGTTCA
TGACCATGTTGCTTGCTGTCGACGCGCCGATTACGTTCAAGTTCGTGCCTGTAGCTTATCTTGTAACAGGCGTTGGCTTT
TTCTTATTATTCCAGGTTCTCTCGCTCCTTTCATTTTGGAAACTTCGCAACCAAGAAGTGATTCAAATGCTGAAAGAAGC
AAGCAAACCAAAGATGATGCCAAAGACATCCATTTGGCTCACCGTGCTTACGGTGATTTGCCTTGCAGCTGGCTATGGGC
TAGCTGTCACCACCAACATGATGACCGTCATGCTAACCATGTTTCCAGTATTAGGGCTTGTTGTAGTCGGCACTTATTTT
CTCTTTACCCAAGGCACAGTAGCGCTTTACAATCGCCTTTACCGCAACAAACGCTCTTTATACTCAGGCACGACTTTAAT
TACGCGGACAAACATTTTGTTTCGCTTAAAAGATTACGCACGCATGTTGTTTTTGACATCTGTCATTAGCGCCGTCGTCC
TGACAGCCTCGGGAACCGTTTATATGTTTTTTAATGCGATCCTCAACGAAGGAATGGGGAATATGCCGTACTCGATTTTC
TGGACGGTTGAAGAAACGGACGATGAGGCCGATATTATTACGACCGAAAAGGTTGAATCATTGCTGGCAGAATACGGCTC
TGAAGTCCTGTTTAAAATTGATGAGCAAATGCTTGACGTTGAGTTTACAGGCACGCCGAGCTATTTGAACGAGGAGACGG
TATTGTCTGGTTCAGTCATCTCGGAAAGCACCTTTAACCGGCTCAGCGAAGACATCGGTTTAGAACCTGTTTCATTAGCA
GGCAATGACATTATTGCTTTTAGTCAAGAAGATCTATTTGCCCCCGCTCAATTTGATGAACTGACAATTACGTTTGGCGA
GTCTGAGCAAACCTTTACGGATCTTGAAGTTCACAATGAGGTTCTGTTTAGTAGCAATAGCACCTTTATCCTTTCAGACG
AAGCGTTTGCCAAAGCGGAGCAGGCCCCCGGCATTCAAACCGAACGTTTCATTGCCTATGAACTCGACGATTGGCAAAAT
GAAACGGACGTATCCGAGGCAATTATGGAAGCAACAGGAGAACATGGTTATATATTGCAAGCTAAGCCGTATCAATACCA
TATGCTGCTGCAAATGTACTCCTTAGTTCTGTTTATTGGCTTGTTTGTCAGCTTGCTATTCTTCATTGTCCAAGGAAGCA
TGCTCTATTTGAAATTGTTTACCGATTTGGCCGATACGAAAAAACAATTGTTTGCCTTAAGCCGGATTGGCTTAACAGAC
AAAGAAAAGCGCAGGATCTTGGATAAACAAATGGGTTTCCTTTTCTTTGTACCTGTGCTTGTCGGCAGCGTCCATGCCAG
CTTTGCCTATGTGATGCTCAGCAACATGCTCGATGTCAATCTCGTACTAAACGCGATCTTGGTCATTTCCATTTATGCTG
CCTTGCAATTGATTTACTTTTTGATCACGAGACTGCTTTACTTCCGTGCCGCTCTCAACTAA

Upstream 100 bases:

>100_bases
AAAGATGGCGCCTTTTTCTCCGAAATTCGCAAAGGTGACCGCCAACAAACATTTTACCAAAACATCTTAGACACGCTTAG
CGTTTTAGGGGGCGATTTCC

Downstream 100 bases:

>100_bases
AAACTTGCACAACAAGCCCCTGGCGAATGGCCAGGGGCTTGAGCTTTGCTCATTGAATTTATCACTCGTGATGCTCGCTC
TCATGAACGTCCGTGCTTTC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MNLRTLARRNITGHAQRYAAYFLSCVFTVMIFFIYAQFIFHPDVAEESMHQVVKNGMVAAQVIIVLFSIFFIAYSNNVFL
QVRSQEFGLLTLFGMNRSQLRSLVYYEQTIISIVAIICGLLLGTLFSKLFLMFMTMLLAVDAPITFKFVPVAYLVTGVGF
FLLFQVLSLLSFWKLRNQEVIQMLKEASKPKMMPKTSIWLTVLTVICLAAGYGLAVTTNMMTVMLTMFPVLGLVVVGTYF
LFTQGTVALYNRLYRNKRSLYSGTTLITRTNILFRLKDYARMLFLTSVISAVVLTASGTVYMFFNAILNEGMGNMPYSIF
WTVEETDDEADIITTEKVESLLAEYGSEVLFKIDEQMLDVEFTGTPSYLNEETVLSGSVISESTFNRLSEDIGLEPVSLA
GNDIIAFSQEDLFAPAQFDELTITFGESEQTFTDLEVHNEVLFSSNSTFILSDEAFAKAEQAPGIQTERFIAYELDDWQN
ETDVSEAIMEATGEHGYILQAKPYQYHMLLQMYSLVLFIGLFVSLLFFIVQGSMLYLKLFTDLADTKKQLFALSRIGLTD
KEKRRILDKQMGFLFFVPVLVGSVHASFAYVMLSNMLDVNLVLNAILVISIYAALQLIYFLITRLLYFRAALN

Sequences:

>Translated_633_residues
MNLRTLARRNITGHAQRYAAYFLSCVFTVMIFFIYAQFIFHPDVAEESMHQVVKNGMVAAQVIIVLFSIFFIAYSNNVFL
QVRSQEFGLLTLFGMNRSQLRSLVYYEQTIISIVAIICGLLLGTLFSKLFLMFMTMLLAVDAPITFKFVPVAYLVTGVGF
FLLFQVLSLLSFWKLRNQEVIQMLKEASKPKMMPKTSIWLTVLTVICLAAGYGLAVTTNMMTVMLTMFPVLGLVVVGTYF
LFTQGTVALYNRLYRNKRSLYSGTTLITRTNILFRLKDYARMLFLTSVISAVVLTASGTVYMFFNAILNEGMGNMPYSIF
WTVEETDDEADIITTEKVESLLAEYGSEVLFKIDEQMLDVEFTGTPSYLNEETVLSGSVISESTFNRLSEDIGLEPVSLA
GNDIIAFSQEDLFAPAQFDELTITFGESEQTFTDLEVHNEVLFSSNSTFILSDEAFAKAEQAPGIQTERFIAYELDDWQN
ETDVSEAIMEATGEHGYILQAKPYQYHMLLQMYSLVLFIGLFVSLLFFIVQGSMLYLKLFTDLADTKKQLFALSRIGLTD
KEKRRILDKQMGFLFFVPVLVGSVHASFAYVMLSNMLDVNLVLNAILVISIYAALQLIYFLITRLLYFRAALN
>Mature_633_residues
MNLRTLARRNITGHAQRYAAYFLSCVFTVMIFFIYAQFIFHPDVAEESMHQVVKNGMVAAQVIIVLFSIFFIAYSNNVFL
QVRSQEFGLLTLFGMNRSQLRSLVYYEQTIISIVAIICGLLLGTLFSKLFLMFMTMLLAVDAPITFKFVPVAYLVTGVGF
FLLFQVLSLLSFWKLRNQEVIQMLKEASKPKMMPKTSIWLTVLTVICLAAGYGLAVTTNMMTVMLTMFPVLGLVVVGTYF
LFTQGTVALYNRLYRNKRSLYSGTTLITRTNILFRLKDYARMLFLTSVISAVVLTASGTVYMFFNAILNEGMGNMPYSIF
WTVEETDDEADIITTEKVESLLAEYGSEVLFKIDEQMLDVEFTGTPSYLNEETVLSGSVISESTFNRLSEDIGLEPVSLA
GNDIIAFSQEDLFAPAQFDELTITFGESEQTFTDLEVHNEVLFSSNSTFILSDEAFAKAEQAPGIQTERFIAYELDDWQN
ETDVSEAIMEATGEHGYILQAKPYQYHMLLQMYSLVLFIGLFVSLLFFIVQGSMLYLKLFTDLADTKKQLFALSRIGLTD
KEKRRILDKQMGFLFFVPVLVGSVHASFAYVMLSNMLDVNLVLNAILVISIYAALQLIYFLITRLLYFRAALN

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 71691; Mature: 71691

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRTLARRNITGHAQRYAAYFLSCVFTVMIFFIYAQFIFHPDVAEESMHQVVKNGMVAA
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
QVIIVLFSIFFIAYSNNVFLQVRSQEFGLLTLFGMNRSQLRSLVYYEQTIISIVAIICGL
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGTLFSKLFLMFMTMLLAVDAPITFKFVPVAYLVTGVGFFLLFQVLSLLSFWKLRNQEV
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IQMLKEASKPKMMPKTSIWLTVLTVICLAAGYGLAVTTNMMTVMLTMFPVLGLVVVGTYF
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTQGTVALYNRLYRNKRSLYSGTTLITRTNILFRLKDYARMLFLTSVISAVVLTASGTV
HHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YMFFNAILNEGMGNMPYSIFWTVEETDDEADIITTEKVESLLAEYGSEVLFKIDEQMLDV
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHEEE
EFTGTPSYLNEETVLSGSVISESTFNRLSEDIGLEPVSLAGNDIIAFSQEDLFAPAQFDE
EECCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCC
LTITFGESEQTFTDLEVHNEVLFSSNSTFILSDEAFAKAEQAPGIQTERFIAYELDDWQN
EEEEECCCCCHHHHHHHHHHHEECCCCEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCC
ETDVSEAIMEATGEHGYILQAKPYQYHMLLQMYSLVLFIGLFVSLLFFIVQGSMLYLKLF
CCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TDLADTKKQLFALSRIGLTDKEKRRILDKQMGFLFFVPVLVGSVHASFAYVMLSNMLDVN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLNAILVISIYAALQLIYFLITRLLYFRAALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLRTLARRNITGHAQRYAAYFLSCVFTVMIFFIYAQFIFHPDVAEESMHQVVKNGMVAA
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
QVIIVLFSIFFIAYSNNVFLQVRSQEFGLLTLFGMNRSQLRSLVYYEQTIISIVAIICGL
HHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGTLFSKLFLMFMTMLLAVDAPITFKFVPVAYLVTGVGFFLLFQVLSLLSFWKLRNQEV
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IQMLKEASKPKMMPKTSIWLTVLTVICLAAGYGLAVTTNMMTVMLTMFPVLGLVVVGTYF
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTQGTVALYNRLYRNKRSLYSGTTLITRTNILFRLKDYARMLFLTSVISAVVLTASGTV
HHHCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YMFFNAILNEGMGNMPYSIFWTVEETDDEADIITTEKVESLLAEYGSEVLFKIDEQMLDV
HHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHHEEE
EFTGTPSYLNEETVLSGSVISESTFNRLSEDIGLEPVSLAGNDIIAFSQEDLFAPAQFDE
EECCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCCCC
LTITFGESEQTFTDLEVHNEVLFSSNSTFILSDEAFAKAEQAPGIQTERFIAYELDDWQN
EEEEECCCCCHHHHHHHHHHHEECCCCEEEECCHHHHHHHCCCCCCCCCEEEEECCCCCC
ETDVSEAIMEATGEHGYILQAKPYQYHMLLQMYSLVLFIGLFVSLLFFIVQGSMLYLKLF
CCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TDLADTKKQLFALSRIGLTDKEKRRILDKQMGFLFFVPVLVGSVHASFAYVMLSNMLDVN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLNAILVISIYAALQLIYFLITRLLYFRAALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]