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The map label for this gene is ybhS [H]

Identifier: 56964950

GI number: 56964950

Start: 3309070

End: 3310227

Strand: Direct

Name: ybhS [H]

Synonym: ABC3186

Alternate gene names: 56964950

Gene position: 3309070-3310227 (Clockwise)

Preceding gene: 56964949

Following gene: 56964951

Centisome position: 76.89

GC content: 41.8

Gene sequence:

>1158_bases
GTGATTCATTTGAATAACCGAGAAAAGCGTTTTCGTTTCGTACGACTACAAGCAATCGTTCGCAAGGAATTTATTCAAAT
AAAAAAAGATCCTGCCAGCCTTGCCATTGCTCTTGTTCTCCCTGTTCTGCTGCTCGTCTTGCTTGGCTATGCGATGAATG
ACGATGTCGAATCAGTTCACTTGTCTATTCTAGACCAGTCACAAACGGCAGAAAGCAGAGAACTAATTGACCGTTTAACA
AGCCAAGGCGACTTTACCATTATGAGTTATGAACACAACGTCAGTGTGCTGGAACACCTCCTGGATAAGGGCGACATTCA
TGCAGGTCTTATTATTCCAGCGAATTATTCAAAAGAACTTACAACAAATACAGCGGTTGTACAATTTTTAATTGACGGGT
CCGATCCGACTTATGCGCAAGAGGCATTGTTTCGAAGTGAGTCGCTTTTGCTAAACTATGCCCATACGGTTCAGGCGGAA
CAATTGATCCGAAGTGGGACAGAAGTCCCCAATAGCCCGTTAAAGCATGAAACACAGGTGTTTTATAACCCTTCCATGGA
CAGCATGGAGTTTAATATTCCGGCTTTAATTGGCCTCATCATGCAAGAAGTTACATTAATTTTAACTGCATTTGCTCTTG
TCCGCGAAAAGGAACAAGGCACGATTGAACAGTTGATCGTTACGCCAATCCGTCCAGCAGAGTTAATTATTGGCAAACTA
GTGCCTTATACGATCATTGGGACATTGTCTTTTGCTTTTGTTCTTTTAGCAGGCGTGTTTTGGTTTGATGTAGCGATTGC
CGGCGACCCCTTCTTACTGGTATTATTAAGTTTGCTATTTCTTGTTGCGACTTTAGCGATGGGTATTTTCATTTCCACCA
TCGCCAAAAACCAACTCCAAGCCATGTATATGTCCTTTGCCGTTATTCTTCCAAGCGTTATTCTCTCCGGTTTTGTTTTT
CCGAGAGAATCGATGCCAATGCTGATTCAACTATTAGGAGGCTTGATCCCTTTAACGTATTTTTTGGAGATTTTAAGGGG
CATTTTCTTAAAAGCAAACTCCCTACAGCTTCTATGGCCGCAAAGTTTTGTATTGCTCGGATTTACCGTTCTGCTTTCCA
TCGCAACAATTGCAAAATTTAAAAAGCATCTCCAGTAA

Upstream 100 bases:

>100_bases
AAAGAGATTATGGACGAATACAGTGTCAAAAACTTAGATGATTTGTTTGTTAAGCTAGCAGAACAACAAGAGCAAGAACA
TGCTTCCCATCTAAAAAAGG

Downstream 100 bases:

>100_bases
ATAGGTGATCAAAATGAACAACGACGACAATAGTCCATCAATAACAGAAGCATTTCAGCTTTTCTTAGATTCGCTAAATG
AATCGAAGAAAAAAACAGCA

Product: multidrug ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MIHLNNREKRFRFVRLQAIVRKEFIQIKKDPASLAIALVLPVLLLVLLGYAMNDDVESVHLSILDQSQTAESRELIDRLT
SQGDFTIMSYEHNVSVLEHLLDKGDIHAGLIIPANYSKELTTNTAVVQFLIDGSDPTYAQEALFRSESLLLNYAHTVQAE
QLIRSGTEVPNSPLKHETQVFYNPSMDSMEFNIPALIGLIMQEVTLILTAFALVREKEQGTIEQLIVTPIRPAELIIGKL
VPYTIIGTLSFAFVLLAGVFWFDVAIAGDPFLLVLLSLLFLVATLAMGIFISTIAKNQLQAMYMSFAVILPSVILSGFVF
PRESMPMLIQLLGGLIPLTYFLEILRGIFLKANSLQLLWPQSFVLLGFTVLLSIATIAKFKKHLQ

Sequences:

>Translated_385_residues
MIHLNNREKRFRFVRLQAIVRKEFIQIKKDPASLAIALVLPVLLLVLLGYAMNDDVESVHLSILDQSQTAESRELIDRLT
SQGDFTIMSYEHNVSVLEHLLDKGDIHAGLIIPANYSKELTTNTAVVQFLIDGSDPTYAQEALFRSESLLLNYAHTVQAE
QLIRSGTEVPNSPLKHETQVFYNPSMDSMEFNIPALIGLIMQEVTLILTAFALVREKEQGTIEQLIVTPIRPAELIIGKL
VPYTIIGTLSFAFVLLAGVFWFDVAIAGDPFLLVLLSLLFLVATLAMGIFISTIAKNQLQAMYMSFAVILPSVILSGFVF
PRESMPMLIQLLGGLIPLTYFLEILRGIFLKANSLQLLWPQSFVLLGFTVLLSIATIAKFKKHLQ
>Mature_385_residues
MIHLNNREKRFRFVRLQAIVRKEFIQIKKDPASLAIALVLPVLLLVLLGYAMNDDVESVHLSILDQSQTAESRELIDRLT
SQGDFTIMSYEHNVSVLEHLLDKGDIHAGLIIPANYSKELTTNTAVVQFLIDGSDPTYAQEALFRSESLLLNYAHTVQAE
QLIRSGTEVPNSPLKHETQVFYNPSMDSMEFNIPALIGLIMQEVTLILTAFALVREKEQGTIEQLIVTPIRPAELIIGKL
VPYTIIGTLSFAFVLLAGVFWFDVAIAGDPFLLVLLSLLFLVATLAMGIFISTIAKNQLQAMYMSFAVILPSVILSGFVF
PRESMPMLIQLLGGLIPLTYFLEILRGIFLKANSLQLLWPQSFVLLGFTVLLSIATIAKFKKHLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=347, Percent_Identity=33.7175792507205, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI1787010, Length=374, Percent_Identity=29.9465240641711, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI48994943, Length=356, Percent_Identity=31.1797752808989, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI226510979, Length=298, Percent_Identity=28.1879194630872, Blast_Score=96, Evalue=3e-21,
Organism=Drosophila melanogaster, GI85725260, Length=368, Percent_Identity=21.7391304347826, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI85725262, Length=367, Percent_Identity=21.7983651226158, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24650855, Length=392, Percent_Identity=20.4081632653061, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24650853, Length=392, Percent_Identity=20.4081632653061, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42987; Mature: 42987

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLNNREKRFRFVRLQAIVRKEFIQIKKDPASLAIALVLPVLLLVLLGYAMNDDVESVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSILDQSQTAESRELIDRLTSQGDFTIMSYEHNVSVLEHLLDKGDIHAGLIIPANYSKEL
HHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCHH
TTNTAVVQFLIDGSDPTYAQEALFRSESLLLNYAHTVQAEQLIRSGTEVPNSPLKHETQV
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
FYNPSMDSMEFNIPALIGLIMQEVTLILTAFALVREKEQGTIEQLIVTPIRPAELIIGKL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
VPYTIIGTLSFAFVLLAGVFWFDVAIAGDPFLLVLLSLLFLVATLAMGIFISTIAKNQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMYMSFAVILPSVILSGFVFPRESMPMLIQLLGGLIPLTYFLEILRGIFLKANSLQLLWP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
QSFVLLGFTVLLSIATIAKFKKHLQ
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIHLNNREKRFRFVRLQAIVRKEFIQIKKDPASLAIALVLPVLLLVLLGYAMNDDVESVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSILDQSQTAESRELIDRLTSQGDFTIMSYEHNVSVLEHLLDKGDIHAGLIIPANYSKEL
HHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCHH
TTNTAVVQFLIDGSDPTYAQEALFRSESLLLNYAHTVQAEQLIRSGTEVPNSPLKHETQV
HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
FYNPSMDSMEFNIPALIGLIMQEVTLILTAFALVREKEQGTIEQLIVTPIRPAELIIGKL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHH
VPYTIIGTLSFAFVLLAGVFWFDVAIAGDPFLLVLLSLLFLVATLAMGIFISTIAKNQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMYMSFAVILPSVILSGFVFPRESMPMLIQLLGGLIPLTYFLEILRGIFLKANSLQLLWP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
QSFVLLGFTVLLSIATIAKFKKHLQ
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]