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The map label for this gene is yobV [H]

Identifier: 56964911

GI number: 56964911

Start: 3272701

End: 3273615

Strand: Direct

Name: yobV [H]

Synonym: ABC3147

Alternate gene names: 56964911

Gene position: 3272701-3273615 (Clockwise)

Preceding gene: 56964910

Following gene: 56964912

Centisome position: 76.04

GC content: 36.94

Gene sequence:

>915_bases
TTGAAATTAGAACGTTTGATATCGATCATATTCAAGCTCCTAAACAATGAGATTTTGTCCGCTTCTCGTTTAGCTGATGA
ATTTCAAGTATCATCGCGAACGATTTATAGAGACATTGAAGCCATTTGTGCGGCTGGGATACCAGTCGTTTCATACCAAG
GCACGAACGGTGGGTTCGGTATCATCAAAGGGTATAAATTTGATAAAAGTTTAATCGGTTCCTATGACCTATCGAATCTC
ATTACGGTGCTTCGTAGTTTATCGGGTATTTTTGAAGATAAAACAATTGACCATACGATTGAAAGGCTAAAATCACTCGA
TCCAAGTGGAAACAATGGAATTTTATCAGTTGACTTAGAAAGCCATCGAACAGAAGCACATTCATTAATCGGTCTGCGAA
ATGCGATACAAGAAAAAAGGATCATTCGCTTTGATTATGTAAGTAGTAAAAACGAATGGACATCACGGGAAATAGAGCCT
ATTCACATTCAATATAAGTTTCGCAACTGGTATTTATATGGCTACTGCAAAGAACGGGGCAACTATAGAGAATTTAGAGT
ATCACGTATGATGAATATTACGCTGACAGAAAAAACATTTGCCAAAAATCACGACGTGAAAAGGGATACATCTTTTTCAG
CTAAAAATCTAGAACGATTTGAGGATGTTGTCATTTGGGTAAGTCGCGATTCCTTAGTAGAAGTGTTGGACCAATTCCAG
CATGCTTCAAAAGTTAAGAACAGTGATGGAAGTATGACGTTTACCATTTCTGTGTATCAACCTTTGCATGCTCGATGGTT
AAAATCGATTCTTTTAAGCTTTGGCAGCGGCGTTAAAATTGTCAAACCTGTGGAATTACAAACGGTTTTAGTAGATGAGG
CAAAAAAAATAATAAATGTTTATCGAGATGTATGA

Upstream 100 bases:

>100_bases
CGATTGAAAAAGTTTATTGAACATACAAGAGAAAATAACATGTACGATCAATGGAATGACAACGGTCGCTTAATCGATTA
TTGAGGAAAGGAACGTACAA

Downstream 100 bases:

>100_bases
CAGGCTGTTGTCATACATCTTTTTTTATACTACAGCTATCAACCGTTAAGGAGTCGATCTGAAAAATGAACCATGCAAAA
AAGATGTACCACTATCATAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKLERLISIIFKLLNNEILSASRLADEFQVSSRTIYRDIEAICAAGIPVVSYQGTNGGFGIIKGYKFDKSLIGSYDLSNL
ITVLRSLSGIFEDKTIDHTIERLKSLDPSGNNGILSVDLESHRTEAHSLIGLRNAIQEKRIIRFDYVSSKNEWTSREIEP
IHIQYKFRNWYLYGYCKERGNYREFRVSRMMNITLTEKTFAKNHDVKRDTSFSAKNLERFEDVVIWVSRDSLVEVLDQFQ
HASKVKNSDGSMTFTISVYQPLHARWLKSILLSFGSGVKIVKPVELQTVLVDEAKKIINVYRDV

Sequences:

>Translated_304_residues
MKLERLISIIFKLLNNEILSASRLADEFQVSSRTIYRDIEAICAAGIPVVSYQGTNGGFGIIKGYKFDKSLIGSYDLSNL
ITVLRSLSGIFEDKTIDHTIERLKSLDPSGNNGILSVDLESHRTEAHSLIGLRNAIQEKRIIRFDYVSSKNEWTSREIEP
IHIQYKFRNWYLYGYCKERGNYREFRVSRMMNITLTEKTFAKNHDVKRDTSFSAKNLERFEDVVIWVSRDSLVEVLDQFQ
HASKVKNSDGSMTFTISVYQPLHARWLKSILLSFGSGVKIVKPVELQTVLVDEAKKIINVYRDV
>Mature_304_residues
MKLERLISIIFKLLNNEILSASRLADEFQVSSRTIYRDIEAICAAGIPVVSYQGTNGGFGIIKGYKFDKSLIGSYDLSNL
ITVLRSLSGIFEDKTIDHTIERLKSLDPSGNNGILSVDLESHRTEAHSLIGLRNAIQEKRIIRFDYVSSKNEWTSREIEP
IHIQYKFRNWYLYGYCKERGNYREFRVSRMMNITLTEKTFAKNHDVKRDTSFSAKNLERFEDVVIWVSRDSLVEVLDQFQ
HASKVKNSDGSMTFTISVYQPLHARWLKSILLSFGSGVKIVKPVELQTVLVDEAKKIINVYRDV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 34959; Mature: 34959

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLERLISIIFKLLNNEILSASRLADEFQVSSRTIYRDIEAICAAGIPVVSYQGTNGGFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE
IIKGYKFDKSLIGSYDLSNLITVLRSLSGIFEDKTIDHTIERLKSLDPSGNNGILSVDLE
EEECCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECH
SHRTEAHSLIGLRNAIQEKRIIRFDYVSSKNEWTSREIEPIHIQYKFRNWYLYGYCKERG
HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCC
NYREFRVSRMMNITLTEKTFAKNHDVKRDTSFSAKNLERFEDVVIWVSRDSLVEVLDQFQ
CHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECCHHHHHHHHHHH
HASKVKNSDGSMTFTISVYQPLHARWLKSILLSFGSGVKIVKPVELQTVLVDEAKKIINV
HHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH
YRDV
HHCC
>Mature Secondary Structure
MKLERLISIIFKLLNNEILSASRLADEFQVSSRTIYRDIEAICAAGIPVVSYQGTNGGFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE
IIKGYKFDKSLIGSYDLSNLITVLRSLSGIFEDKTIDHTIERLKSLDPSGNNGILSVDLE
EEECCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECH
SHRTEAHSLIGLRNAIQEKRIIRFDYVSSKNEWTSREIEPIHIQYKFRNWYLYGYCKERG
HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCC
NYREFRVSRMMNITLTEKTFAKNHDVKRDTSFSAKNLERFEDVVIWVSRDSLVEVLDQFQ
CHHHHHHHHHEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECCHHHHHHHHHHH
HASKVKNSDGSMTFTISVYQPLHARWLKSILLSFGSGVKIVKPVELQTVLVDEAKKIINV
HHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH
YRDV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]