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The map label for this gene is ymaB [H]

Identifier: 56964874

GI number: 56964874

Start: 3237699

End: 3238325

Strand: Direct

Name: ymaB [H]

Synonym: ABC3110

Alternate gene names: 56964874

Gene position: 3237699-3238325 (Clockwise)

Preceding gene: 56964873

Following gene: 56964876

Centisome position: 75.23

GC content: 46.89

Gene sequence:

>627_bases
TTGGGAAAAATGGATGAAATGATTGTTGTCGCACCGCGCAAACACGTTTTCCATAACGAAACGCTTGCTTTTCAAGGCGT
TGTGAGCGAACGGGAACAAGTCGCAACGATTATGAACCGCCTTAACCGCCACTTCAGCGAGATGCGCCGTGGCAATGCAG
AAGAAGACACCACTTACAAACAGCCAATTCCTTATGTCGTCATTCGTCGTGGGAAAGAAATCTACTCCTACGAACGCCTA
AGCGGCGGCGGCGAGGCCCGCTTGCATAATCAACTTTCCATTGGCTTTGGCGGCCATATGAATGCCATTATGTCATCAAG
CTTTATTGAAATGCTTGAAGCCAATACACATCGAGAATTACACGAAGAACTTATTTTTGATGCAAGCAAGCAAAAAGCAA
TGAAGACGATTGGCTTAATTAACGACGATGCCAACGAAGTCGGCCGCGTCCACCTAGGTATTCTCTCCGTCCTTGATCTC
GAAGAGGATACAGACGTTGCCATCCGGGAAACAAATCAACTTGCCGGGCGTTGGGTTACCCTTGAAGAGCTAAGCGCTCA
GCCGATGTATGACCGGCTAGAAAGCTGGTCCAAATTCGTTGTTGATATTTTAAACCATACTTCTTAA

Upstream 100 bases:

>100_bases
TCCTCTTGCTTTGCATGCCTAGCTGTACGATAATGTACATGTTCAACGATCAGCAGCGATGCCTTTTCACTTGCTGCTTT
TTCGACAGGGGGAAACTACG

Downstream 100 bases:

>100_bases
TACGTTAAGCCCGCTATATGTAAATAGCGGGCTATTATTCGGACTTCTACACAACCGTTGCTCCCAATGCTTGCTGAAAG
TGGCGCAAGGCCCACTCATG

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MGKMDEMIVVAPRKHVFHNETLAFQGVVSEREQVATIMNRLNRHFSEMRRGNAEEDTTYKQPIPYVVIRRGKEIYSYERL
SGGGEARLHNQLSIGFGGHMNAIMSSSFIEMLEANTHRELHEELIFDASKQKAMKTIGLINDDANEVGRVHLGILSVLDL
EEDTDVAIRETNQLAGRWVTLEELSAQPMYDRLESWSKFVVDILNHTS

Sequences:

>Translated_208_residues
MGKMDEMIVVAPRKHVFHNETLAFQGVVSEREQVATIMNRLNRHFSEMRRGNAEEDTTYKQPIPYVVIRRGKEIYSYERL
SGGGEARLHNQLSIGFGGHMNAIMSSSFIEMLEANTHRELHEELIFDASKQKAMKTIGLINDDANEVGRVHLGILSVLDL
EEDTDVAIRETNQLAGRWVTLEELSAQPMYDRLESWSKFVVDILNHTS
>Mature_207_residues
GKMDEMIVVAPRKHVFHNETLAFQGVVSEREQVATIMNRLNRHFSEMRRGNAEEDTTYKQPIPYVVIRRGKEIYSYERLS
GGGEARLHNQLSIGFGGHMNAIMSSSFIEMLEANTHRELHEELIFDASKQKAMKTIGLINDDANEVGRVHLGILSVLDLE
EDTDVAIRETNQLAGRWVTLEELSAQPMYDRLESWSKFVVDILNHTS

Specific function: Unknown

COG id: COG4112

COG function: function code R; Predicted phosphoesterase (MutT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23744; Mature: 23613

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKMDEMIVVAPRKHVFHNETLAFQGVVSEREQVATIMNRLNRHFSEMRRGNAEEDTTYK
CCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIRRGKEIYSYERLSGGGEARLHNQLSIGFGGHMNAIMSSSFIEMLEANTHREL
CCCCEEEEECCCHHHHHHHHCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
HEELIFDASKQKAMKTIGLINDDANEVGRVHLGILSVLDLEEDTDVAIRETNQLAGRWVT
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEHHHHHHCCEEE
LEELSAQPMYDRLESWSKFVVDILNHTS
HHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKMDEMIVVAPRKHVFHNETLAFQGVVSEREQVATIMNRLNRHFSEMRRGNAEEDTTYK
CCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIRRGKEIYSYERLSGGGEARLHNQLSIGFGGHMNAIMSSSFIEMLEANTHREL
CCCCEEEEECCCHHHHHHHHCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHCCHHHHH
HEELIFDASKQKAMKTIGLINDDANEVGRVHLGILSVLDLEEDTDVAIRETNQLAGRWVT
HHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHEHHHHHHCCEEE
LEELSAQPMYDRLESWSKFVVDILNHTS
HHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8407798 [H]