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The map label for this gene is yutI [H]

Identifier: 56964703

GI number: 56964703

Start: 3063457

End: 3063696

Strand: Direct

Name: yutI [H]

Synonym: ABC2939

Alternate gene names: 56964703

Gene position: 3063457-3063696 (Clockwise)

Preceding gene: 56964701

Following gene: 56964708

Centisome position: 71.18

GC content: 46.25

Gene sequence:

>240_bases
ATGGAAACAAGCACTGAGTTGATGGAGCAAGTCCAAGAAGTACTTGACAAGCTTCGTCCGTTTTTGCTTCGTGACGGCGG
CGACGTTGAGCTGATTGACGTAGAAGATGGCGTCGTAAAAGTTCGCCTTCTAGGTGCATGCGGTTCATGCCCAAGTTCAA
CGATTACGTTGAAAGCTGGAATTGAACGTGCTCTTCTTGAAGAAGTACCAGGCATTACGGAGATTGAACAAGTCTTTTAA

Upstream 100 bases:

>100_bases
CAACGCCTGTATGATAAAAATCGAGAAAGATGGTAGCAATGCATGGATTTTTTTTAACGCGCCTATTATAATGGAGAATA
AGCAGAAAGGAGTGGTTCGA

Downstream 100 bases:

>100_bases
TCGCTAAAAATCAACAGCAGCATCGTTTCCATGCTGCTGTTTTGCACACAAAAGCCGACCCAAAAGGTCGGCTTCTTTTA
CGTGTCCATATCATTTGTCA

Product: nitrogen fixation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
METSTELMEQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAGIERALLEEVPGITEIEQVF

Sequences:

>Translated_79_residues
METSTELMEQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAGIERALLEEVPGITEIEQVF
>Mature_79_residues
METSTELMEQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAGIERALLEEVPGITEIEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593025, Length=78, Percent_Identity=44.8717948717949, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI50593021, Length=78, Percent_Identity=44.8717948717949, Blast_Score=68, Evalue=2e-12,
Organism=Homo sapiens, GI50593023, Length=79, Percent_Identity=44.3037974683544, Blast_Score=67, Evalue=3e-12,
Organism=Homo sapiens, GI50593019, Length=79, Percent_Identity=44.3037974683544, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17541876, Length=79, Percent_Identity=40.5063291139241, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322811, Length=80, Percent_Identity=42.5, Blast_Score=61, Evalue=4e-11,
Organism=Drosophila melanogaster, GI45551492, Length=80, Percent_Identity=41.25, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24643765, Length=80, Percent_Identity=41.25, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45556188, Length=80, Percent_Identity=41.25, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8631; Mature: 8631

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSTELMEQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAG
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEHHH
IERALLEEVPGITEIEQVF
HHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure
METSTELMEQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAG
CCCHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEEEEEEEECCCCCCCCEEEEHHH
IERALLEEVPGITEIEQVF
HHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]