Click here to switch to the map view.

The map label for this gene is yvdA [H]

Identifier: 56964639

GI number: 56964639

Start: 3004763

End: 3005365

Strand: Direct

Name: yvdA [H]

Synonym: ABC2875

Alternate gene names: 56964639

Gene position: 3004763-3005365 (Clockwise)

Preceding gene: 56964638

Following gene: 56964641

Centisome position: 69.82

GC content: 41.96

Gene sequence:

>603_bases
GTGATCCAAATGAGCAAACTTGAATCGATTCTAGCTTTTAATGAAGCATTTGTAGCTAATAAAGAATATGAGCGCTTTAA
AGCAGACAAATTTCCGCAAAAGAAAATCGTTATTTTAACATGCATGGATACGCGGCTCGTTGAATTGCTCCATAATGCGA
TGAATTTAAAAAATGGCGACGCTAAAATTATCCGTAATGCTGGCGCTGTCATCTCCCATCCATTTGGCAGCATCATGCGC
AGCATTCTAGTTGCCATTTATGAATTAGGCGCAGAAGAAGTGTTTGTTATTGGCCATTACGGCTGTGGAATGACAGGCCT
TTCTGCAAATTCCGTTCTCCAAAAGGCTGAAGAACGGGGCATTGATATGGATGAAATCAATGCACTCCAATACGCAGGTG
TAGATGTGAACAAGTTTTTAACTGGTTTTGAAAATGTAACGGAAAGCGTCAACCACAGTGTCGATATGGTTATTAACCAC
CCACTTTTGCCAAAGGATGTACGGGTTCACGGTCTAGTCATCGATCCTGAAACAGGAAAGCTTGATTTGCTACAACGTGA
TTTGCAAAAAGGGGCAAACGCCAAGGAGCCGCAAGACGCATAA

Upstream 100 bases:

>100_bases
CTCCTTTTGTGGTAGCCATTGAAAAACGAGCGAAATTTCATCTTTAAGCGTCCGAGCAAGAGAAAACACTGGGTTTTCTA
AAGAAAAGATAGAAGGAGAA

Downstream 100 bases:

>100_bases
CAAAATGAAATAGACAGCAAAAAGATGGCCTCGGGTGGTACCCGAGGCCATCTTTTTATCGATGACTGCCTGTTACGGAA
ACAGCATATTCACAAAGCCG

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIQMSKLESILAFNEAFVANKEYERFKADKFPQKKIVILTCMDTRLVELLHNAMNLKNGDAKIIRNAGAVISHPFGSIMR
SILVAIYELGAEEVFVIGHYGCGMTGLSANSVLQKAEERGIDMDEINALQYAGVDVNKFLTGFENVTESVNHSVDMVINH
PLLPKDVRVHGLVIDPETGKLDLLQRDLQKGANAKEPQDA

Sequences:

>Translated_200_residues
MIQMSKLESILAFNEAFVANKEYERFKADKFPQKKIVILTCMDTRLVELLHNAMNLKNGDAKIIRNAGAVISHPFGSIMR
SILVAIYELGAEEVFVIGHYGCGMTGLSANSVLQKAEERGIDMDEINALQYAGVDVNKFLTGFENVTESVNHSVDMVINH
PLLPKDVRVHGLVIDPETGKLDLLQRDLQKGANAKEPQDA
>Mature_200_residues
MIQMSKLESILAFNEAFVANKEYERFKADKFPQKKIVILTCMDTRLVELLHNAMNLKNGDAKIIRNAGAVISHPFGSIMR
SILVAIYELGAEEVFVIGHYGCGMTGLSANSVLQKAEERGIDMDEINALQYAGVDVNKFLTGFENVTESVNHSVDMVINH
PLLPKDVRVHGLVIDPETGKLDLLQRDLQKGANAKEPQDA

Specific function: Reversible hydration of carbon dioxide [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 22139; Mature: 22139

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQMSKLESILAFNEAFVANKEYERFKADKFPQKKIVILTCMDTRLVELLHNAMNLKNGD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCC
AKIIRNAGAVISHPFGSIMRSILVAIYELGAEEVFVIGHYGCGMTGLSANSVLQKAEERG
HHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC
IDMDEINALQYAGVDVNKFLTGFENVTESVNHSVDMVINHPLLPKDVRVHGLVIDPETGK
CCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCC
LDLLQRDLQKGANAKEPQDA
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIQMSKLESILAFNEAFVANKEYERFKADKFPQKKIVILTCMDTRLVELLHNAMNLKNGD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCC
AKIIRNAGAVISHPFGSIMRSILVAIYELGAEEVFVIGHYGCGMTGLSANSVLQKAEERG
HHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC
IDMDEINALQYAGVDVNKFLTGFENVTESVNHSVDMVINHPLLPKDVRVHGLVIDPETGK
CCHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCC
LDLLQRDLQKGANAKEPQDA
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]