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The map label for this gene is ytqB [H]

Identifier: 56964638

GI number: 56964638

Start: 3004125

End: 3004709

Strand: Direct

Name: ytqB [H]

Synonym: ABC2874

Alternate gene names: 56964638

Gene position: 3004125-3004709 (Clockwise)

Preceding gene: 56964630

Following gene: 56964639

Centisome position: 69.8

GC content: 46.15

Gene sequence:

>585_bases
GTGAACCTTCTTGGCGTCCTGCCATTTGCCCATTCGTTGCTTACCAGCGCTGTCCAGCCAGGGGACACCGTCGTTGATGC
GACAATTGGAAATGGACACGATACATTGGTTTTGGCTAAACTTGTTGGTGAAACAGGCGTTGTGATTGGCTGTGACATCC
AAGCATCCGCACTAACCTCTACAGAAGCACGCCTTCAAAAGGCAGGTTTGGACAAGCAAGTATCCCTATTCCAAATCGGC
CATGAAAAGTTGGCGACTTTGCCGTTGTTTGTCAACTCAACCATCGCCGCTGCCATCTTTAATTTAGGCTATTTGCCTGG
CGGAGACAAAGGCGTTACAACAACAGGGAAAACGACAATTGCAGCGATTGAGCAACTATTTAACCGTTTAAAACAAGGCG
GCCTGATTGTTCTCGTCGTCTACCATGGACACCCACAAGGCAAAAAGGAAAAAAACGAACTGTTGGCTTATGTCGAATCG
CTTCCTCAAGAAAAGGCCCATGCAGCGACGTACCAATTTATTAACCAAAAAAATGATCCTCCTTTTGTGGTAGCCATTGA
AAAACGAGCGAAATTTCATCTTTAA

Upstream 100 bases:

>100_bases
CCGTGTTCCCGTTCCCAGTCAGCTGCTTTTGGTATTTGCCTGACGTGTTTGCGTTAATTAAACAGCCTTTAATATGCCCC
GCCTTTTGGGGGGAGGAGCC

Downstream 100 bases:

>100_bases
GCGTCCGAGCAAGAGAAAACACTGGGTTTTCTAAAGAAAAGATAGAAGGAGAAGTGATCCAAATGAGCAAACTTGAATCG
ATTCTAGCTTTTAATGAAGC

Product: S-adenosylmethionine (SAM)-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNLLGVLPFAHSLLTSAVQPGDTVVDATIGNGHDTLVLAKLVGETGVVIGCDIQASALTSTEARLQKAGLDKQVSLFQIG
HEKLATLPLFVNSTIAAAIFNLGYLPGGDKGVTTTGKTTIAAIEQLFNRLKQGGLIVLVVYHGHPQGKKEKNELLAYVES
LPQEKAHAATYQFINQKNDPPFVVAIEKRAKFHL

Sequences:

>Translated_194_residues
MNLLGVLPFAHSLLTSAVQPGDTVVDATIGNGHDTLVLAKLVGETGVVIGCDIQASALTSTEARLQKAGLDKQVSLFQIG
HEKLATLPLFVNSTIAAAIFNLGYLPGGDKGVTTTGKTTIAAIEQLFNRLKQGGLIVLVVYHGHPQGKKEKNELLAYVES
LPQEKAHAATYQFINQKNDPPFVVAIEKRAKFHL
>Mature_194_residues
MNLLGVLPFAHSLLTSAVQPGDTVVDATIGNGHDTLVLAKLVGETGVVIGCDIQASALTSTEARLQKAGLDKQVSLFQIG
HEKLATLPLFVNSTIAAAIFNLGYLPGGDKGVTTTGKTTIAAIEQLFNRLKQGGLIVLVVYHGHPQGKKEKNELLAYVES
LPQEKAHAATYQFINQKNDPPFVVAIEKRAKFHL

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20706; Mature: 20706

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLGVLPFAHSLLTSAVQPGDTVVDATIGNGHDTLVLAKLVGETGVVIGCDIQASALTS
CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHEEHHCCCCEEEECCCCHHHHHH
TEARLQKAGLDKQVSLFQIGHEKLATLPLFVNSTIAAAIFNLGYLPGGDKGVTTTGKTTI
HHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAIEQLFNRLKQGGLIVLVVYHGHPQGKKEKNELLAYVESLPQEKAHAATYQFINQKNDP
HHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
PFVVAIEKRAKFHL
CEEEEEECCCCCCC
>Mature Secondary Structure
MNLLGVLPFAHSLLTSAVQPGDTVVDATIGNGHDTLVLAKLVGETGVVIGCDIQASALTS
CCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHEEHHCCCCEEEECCCCHHHHHH
TEARLQKAGLDKQVSLFQIGHEKLATLPLFVNSTIAAAIFNLGYLPGGDKGVTTTGKTTI
HHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
AAIEQLFNRLKQGGLIVLVVYHGHPQGKKEKNELLAYVESLPQEKAHAATYQFINQKNDP
HHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
PFVVAIEKRAKFHL
CEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]