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The map label for this gene is ysdB [H]

Identifier: 56964449

GI number: 56964449

Start: 2816821

End: 2817222

Strand: Direct

Name: ysdB [H]

Synonym: ABC2684

Alternate gene names: 56964449

Gene position: 2816821-2817222 (Clockwise)

Preceding gene: 56964447

Following gene: 56964490

Centisome position: 65.45

GC content: 39.05

Gene sequence:

>402_bases
GTGCTCGTCCTAATCTTCCGGCTACTGATAGTAGCTACCATTGTTGTCATTTCCTATAGTTTAATAAAATATACATTGCA
GCCTGAACGAAAGCTAAAAAAAGCCCAGAACGCGCATCAGTTTTATTTTTTGGACGATAGCACGAATGTGCGCAAAAATT
TCCAACTCACATTTAAAGGAATTATGTTTGAAGGAGAGAAGTATTTAGAGGCGACAAAGGAATCATTTGAAGTCGTTCGC
GTTTATATAAAAGCAGATACAGATAGACTCCGCGGCTTAACTTTTTCTGACTTCCATTTTATTGAAGAAGAAGTCCTCTT
ACGTTATCCAGAGGCGACAATTGAATGGGCATCACCGATTAAAGAGTTTATGAAACAAGCAAAACAGCCTGAGGAGCGCT
AG

Upstream 100 bases:

>100_bases
TTAAAAGCCAAATAGAAACTTTTATTAATAAAAGTGAAACCTTTTTTGTTGTAGAGCCGTATATATTGAAAACCATTATG
CCAAAAAGGGGGTTTAGCCC

Downstream 100 bases:

>100_bases
GATTAGCGCTCCTCCTGTACTGTCAACACATGTTCGCATACGTTGTGTTTTCGCAGCTCTTTGTTCCGACACAAACGTCA
AGTTCTATTCGCTACTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLVLIFRLLIVATIVVISYSLIKYTLQPERKLKKAQNAHQFYFLDDSTNVRKNFQLTFKGIMFEGEKYLEATKESFEVVR
VYIKADTDRLRGLTFSDFHFIEEEVLLRYPEATIEWASPIKEFMKQAKQPEER

Sequences:

>Translated_133_residues
MLVLIFRLLIVATIVVISYSLIKYTLQPERKLKKAQNAHQFYFLDDSTNVRKNFQLTFKGIMFEGEKYLEATKESFEVVR
VYIKADTDRLRGLTFSDFHFIEEEVLLRYPEATIEWASPIKEFMKQAKQPEER
>Mature_133_residues
MLVLIFRLLIVATIVVISYSLIKYTLQPERKLKKAQNAHQFYFLDDSTNVRKNFQLTFKGIMFEGEKYLEATKESFEVVR
VYIKADTDRLRGLTFSDFHFIEEEVLLRYPEATIEWASPIKEFMKQAKQPEER

Specific function: May mediate a negative feedback loop that down-regulates the expression of the sigma-W regulon following the activation of sigma-W in response to conditions of cell envelope stress. Might interact with and inhibit the activity of the protease prsW, or cou

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15820; Mature: 15820

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLIFRLLIVATIVVISYSLIKYTLQPERKLKKAQNAHQFYFLDDSTNVRKNFQLTFKG
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEE
IMFEGEKYLEATKESFEVVRVYIKADTDRLRGLTFSDFHFIEEEVLLRYPEATIEWASPI
EEECCHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KEFMKQAKQPEER
HHHHHHHCCCCCC
>Mature Secondary Structure
MLVLIFRLLIVATIVVISYSLIKYTLQPERKLKKAQNAHQFYFLDDSTNVRKNFQLTFKG
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEE
IMFEGEKYLEATKESFEVVRVYIKADTDRLRGLTFSDFHFIEEEVLLRYPEATIEWASPI
EEECCHHHHHHHHHHHHHHHHEEECCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KEFMKQAKQPEER
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377; 12207695 [H]