Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 56964289

GI number: 56964289

Start: 2643419

End: 2643814

Strand: Direct

Name: yjbI [H]

Synonym: ABC2524

Alternate gene names: 56964289

Gene position: 2643419-2643814 (Clockwise)

Preceding gene: 56964287

Following gene: 56964290

Centisome position: 61.42

GC content: 48.23

Gene sequence:

>396_bases
GTGCCTGATCAACGAAATGAACAAAGCCCGTTTGAGGCTTTAGGTGGGGAAGAAAAGATAAGCGAACTTGTCGATGCTTT
TTATCGCTACATCGCGGCTCATGAAGACGTTCGCCACCTTTTTCCTGAAGACCTGACTCATACAGCATACAAACAAAAGC
GGTTTTTAACGCAATTTTTCGGCGGTCCACCGCTCTATACAGAAGAGTTTGGGCACCCGAGACTAAGAGCGCGGCATATG
CCGTTTGTCATCTCTCCTGTCCAAGCTGAAGCTTGGCTTTCCTGTATGGAGCGTGCCATGGACGACGTGCATTTATCAGG
CGACATCCGTGATTATATGATGCATCGGCTTAGGCTTACTGCACATCATATGGTTAATCACCCAACGCCGGGATAA

Upstream 100 bases:

>100_bases
AGAAAGGATTTCCTCTTTTTAACTCTAAAAACACTTTATTTGCTGAACGGAACAATGGTTGCTACAATGGATCTAGGCAA
ACGAAAAGGAGAGACCATTT

Downstream 100 bases:

>100_bases
AAGAAAGGAGTTGGCCCATGAACGCCAAACATCGCGTGACTAGCCATTGTGACCATGAACTCGGGATTTGCGGCATTTCT
CCCGAGGCAAATGAAGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPDQRNEQSPFEALGGEEKISELVDAFYRYIAAHEDVRHLFPEDLTHTAYKQKRFLTQFFGGPPLYTEEFGHPRLRARHM
PFVISPVQAEAWLSCMERAMDDVHLSGDIRDYMMHRLRLTAHHMVNHPTPG

Sequences:

>Translated_131_residues
MPDQRNEQSPFEALGGEEKISELVDAFYRYIAAHEDVRHLFPEDLTHTAYKQKRFLTQFFGGPPLYTEEFGHPRLRARHM
PFVISPVQAEAWLSCMERAMDDVHLSGDIRDYMMHRLRLTAHHMVNHPTPG
>Mature_130_residues
PDQRNEQSPFEALGGEEKISELVDAFYRYIAAHEDVRHLFPEDLTHTAYKQKRFLTQFFGGPPLYTEEFGHPRLRARHMP
FVISPVQAEAWLSCMERAMDDVHLSGDIRDYMMHRLRLTAHHMVNHPTPG

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15319; Mature: 15187

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDQRNEQSPFEALGGEEKISELVDAFYRYIAAHEDVRHLFPEDLTHTAYKQKRFLTQFF
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GGPPLYTEEFGHPRLRARHMPFVISPVQAEAWLSCMERAMDDVHLSGDIRDYMMHRLRLT
CCCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AHHMVNHPTPG
HHHHHCCCCCC
>Mature Secondary Structure 
PDQRNEQSPFEALGGEEKISELVDAFYRYIAAHEDVRHLFPEDLTHTAYKQKRFLTQFF
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GGPPLYTEEFGHPRLRARHMPFVISPVQAEAWLSCMERAMDDVHLSGDIRDYMMHRLRLT
CCCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AHHMVNHPTPG
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]