| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is yloA [H]
Identifier: 56964090
GI number: 56964090
Start: 2450739
End: 2452445
Strand: Direct
Name: yloA [H]
Synonym: ABC2325
Alternate gene names: 56964090
Gene position: 2450739-2452445 (Clockwise)
Preceding gene: 56964076
Following gene: 56964134
Centisome position: 56.94
GC content: 46.46
Gene sequence:
>1707_bases ATGTCTTTTGACGGCATGATGACAAGAGCAATCACACATGAATTGCAGCAATTAGTCGGCGGCCGGATTAATAAAATCCA CCAGCCATTTAAAACAGAACTTGTATTTACTGTTCGAGCAAAAGGGAAGACCCGTGCCCTTCTCGCCTCTGCCAACGCTG TGTTTGCACGCCTGCACTTAACAACGGAAAAATACGACAACCCCGCCGAGCCGCCAATGTTTTGTATGCTGTTGCGGAAA CACCTGGAAGGCGGCATCATTACGTCGATTACCCAACATGGCTATGACCGGATAATTGTCTTAAAAGTCGCCAATAAAGA TGAGCTTGGCGATACAACAGAAAAAACGTTGATTGTGGAAATCATGGGGCGACATAGCAACATTATTTTAGTTGACGAAA AAACAAACACGATTATCGACAGCATTAAGCACGTCCGCTTTGACCAAAGCAGTTACCGTCTCGTTGGCCCTGGACAGCCA TATAAATGGCCACCAGAGCAAAATAAACTCGATCCTCTTACGGCGACAGAAAAAGATGTTCTTTTCGCGCTTGATTTTCA TGGAGGGAAATTGGACAAACAACTTGTCCAATCATTTGCGGGTCTTTCTCCCTTGATCGCAGCTGAAATTGTCGCCCGGG CCAAATTGGCTAACCGGCAAACGTTGCCCCCTGCATTTGTTAGCACGTTGGCACCGTTGAAAAACCACGAGTATACGCTA GAACTCGTGCAAGGTGAAAAAGACTATTTTTCAGTCATTCATCTTAGTCATAAAAACGGGGAACGCCACGTGTTTTCCTC ACCAAGTGCTCTTTTAGATCGCTATTACTATGGCAAAGCAGAACGGGACCGGGTCAAACAACAAGCGTTCGATCTGGAGC GCTTGCTCAAAAACGAATACCAAAAAAACAAACGGAAGTTAAAAAAGTTAGAGCAGACGCTTCAACAAGCAGATGAAGCA GACAGCTACCAAAAACAAGGAGAGTTGCTAACTGCCAACATTCATGCCGTTGACCGCGGCGCTTCATCCGTAGACGTCAT TGACTATTATGACGAAAATGGCCAAACCATCACCATTGCCCTCGACCCGCAGAAAAGCCCAGCAGAAAATGCGCAGTCCT ATTTTAAACGCTACCAGAAAGCGAAGACGGCGCGTATTGAAGTCATGAATCAACAAGAGAAAACAGAACAAGAACTGGCC TATCTTGATTCGCTGCTCGCGCAAATGGCTTCTGCCTCTCCACGCGACATCGAGGAAATTCGCGAAGAGCTGATTGAAGG TGGCTACATTAAAAAGCGGCAACAAGGCAAAAAGAAGAAAAAACAACTGGATAAACCACAGTTAGAAACATACCGTTCTT CTACTGGCATTGAGTTTTTAGTAGGGAAAAACAACCGCCAAAACGACTATTTGACAAACCGTCTCGCACGGCAAGATGAC ATTTGGCTCCACACGAAAGACATCCCAGGTTCACACGTCGTCATCCGCTCAGCCTCGCCAGATGAAGAAACGTTAACAGA AGCAGCGCTTGTCGCCGCCTTTTTCTCGAAAGCGCGCGACTCTGCTTCCGTTCCGGTCGATTATACAAAAATACGCTATG TGAAAAAACCAAGCGGCGCCAAGCCTGGCTATGTCACATACGACAAGCAGACGACGCTTTTCGTAACGCCAAAAGAAGAC ATTGTCCGCTCGCTTCGTATCGATTAG
Upstream 100 bases:
>100_bases TCGGTATACAAGCCATCTTATTCAGTGTCAGGCAAAAAAATGCTATACTCATTGTGAAACATCGTCGCAACGGAAGATGA GGAATGAAGAGGTGAGATAC
Downstream 100 bases:
>100_bases AAAACGTACGATGATCGCACAACACACTCCTGTACGGTCGCAGGCGAGAGCGGCAAACAGGAGTGTAGTTAGCCGATTTT ATGAGGTACTTCGCCAGCGC
Product: fibronectin/fibrinogen-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MSFDGMMTRAITHELQQLVGGRINKIHQPFKTELVFTVRAKGKTRALLASANAVFARLHLTTEKYDNPAEPPMFCMLLRK HLEGGIITSITQHGYDRIIVLKVANKDELGDTTEKTLIVEIMGRHSNIILVDEKTNTIIDSIKHVRFDQSSYRLVGPGQP YKWPPEQNKLDPLTATEKDVLFALDFHGGKLDKQLVQSFAGLSPLIAAEIVARAKLANRQTLPPAFVSTLAPLKNHEYTL ELVQGEKDYFSVIHLSHKNGERHVFSSPSALLDRYYYGKAERDRVKQQAFDLERLLKNEYQKNKRKLKKLEQTLQQADEA DSYQKQGELLTANIHAVDRGASSVDVIDYYDENGQTITIALDPQKSPAENAQSYFKRYQKAKTARIEVMNQQEKTEQELA YLDSLLAQMASASPRDIEEIREELIEGGYIKKRQQGKKKKKQLDKPQLETYRSSTGIEFLVGKNNRQNDYLTNRLARQDD IWLHTKDIPGSHVVIRSASPDEETLTEAALVAAFFSKARDSASVPVDYTKIRYVKKPSGAKPGYVTYDKQTTLFVTPKED IVRSLRID
Sequences:
>Translated_568_residues MSFDGMMTRAITHELQQLVGGRINKIHQPFKTELVFTVRAKGKTRALLASANAVFARLHLTTEKYDNPAEPPMFCMLLRK HLEGGIITSITQHGYDRIIVLKVANKDELGDTTEKTLIVEIMGRHSNIILVDEKTNTIIDSIKHVRFDQSSYRLVGPGQP YKWPPEQNKLDPLTATEKDVLFALDFHGGKLDKQLVQSFAGLSPLIAAEIVARAKLANRQTLPPAFVSTLAPLKNHEYTL ELVQGEKDYFSVIHLSHKNGERHVFSSPSALLDRYYYGKAERDRVKQQAFDLERLLKNEYQKNKRKLKKLEQTLQQADEA DSYQKQGELLTANIHAVDRGASSVDVIDYYDENGQTITIALDPQKSPAENAQSYFKRYQKAKTARIEVMNQQEKTEQELA YLDSLLAQMASASPRDIEEIREELIEGGYIKKRQQGKKKKKQLDKPQLETYRSSTGIEFLVGKNNRQNDYLTNRLARQDD IWLHTKDIPGSHVVIRSASPDEETLTEAALVAAFFSKARDSASVPVDYTKIRYVKKPSGAKPGYVTYDKQTTLFVTPKED IVRSLRID >Mature_567_residues SFDGMMTRAITHELQQLVGGRINKIHQPFKTELVFTVRAKGKTRALLASANAVFARLHLTTEKYDNPAEPPMFCMLLRKH LEGGIITSITQHGYDRIIVLKVANKDELGDTTEKTLIVEIMGRHSNIILVDEKTNTIIDSIKHVRFDQSSYRLVGPGQPY KWPPEQNKLDPLTATEKDVLFALDFHGGKLDKQLVQSFAGLSPLIAAEIVARAKLANRQTLPPAFVSTLAPLKNHEYTLE LVQGEKDYFSVIHLSHKNGERHVFSSPSALLDRYYYGKAERDRVKQQAFDLERLLKNEYQKNKRKLKKLEQTLQQADEAD SYQKQGELLTANIHAVDRGASSVDVIDYYDENGQTITIALDPQKSPAENAQSYFKRYQKAKTARIEVMNQQEKTEQELAY LDSLLAQMASASPRDIEEIREELIEGGYIKKRQQGKKKKKQLDKPQLETYRSSTGIEFLVGKNNRQNDYLTNRLARQDDI WLHTKDIPGSHVVIRSASPDEETLTEAALVAAFFSKARDSASVPVDYTKIRYVKKPSGAKPGYVTYDKQTTLFVTPKEDI VRSLRID
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SDCCAG1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 64508; Mature: 64377
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDGMMTRAITHELQQLVGGRINKIHQPFKTELVFTVRAKGKTRALLASANAVFARLHL CCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCEEEEEEEE TTEKYDNPAEPPMFCMLLRKHLEGGIITSITQHGYDRIIVLKVANKDELGDTTEKTLIVE EHHHCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCCCCCHHHEEEEE IMGRHSNIILVDEKTNTIIDSIKHVRFDQSSYRLVGPGQPYKWPPEQNKLDPLTATEKDV EECCCCCEEEEECCCHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCE LFALDFHGGKLDKQLVQSFAGLSPLIAAEIVARAKLANRQTLPPAFVSTLAPLKNHEYTL EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE ELVQGEKDYFSVIHLSHKNGERHVFSSPSALLDRYYYGKAERDRVKQQAFDLERLLKNEY EEECCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QKNKRKLKKLEQTLQQADEADSYQKQGELLTANIHAVDRGASSVDVIDYYDENGQTITIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEE LDPQKSPAENAQSYFKRYQKAKTARIEVMNQQEKTEQELAYLDSLLAQMASASPRDIEEI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH REELIEGGYIKKRQQGKKKKKQLDKPQLETYRSSTGIEFLVGKNNRQNDYLTNRLARQDD HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCC IWLHTKDIPGSHVVIRSASPDEETLTEAALVAAFFSKARDSASVPVDYTKIRYVKKPSGA CEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCC KPGYVTYDKQTTLFVTPKEDIVRSLRID CCCEEEECCCEEEEECCHHHHHHHHCCC >Mature Secondary Structure SFDGMMTRAITHELQQLVGGRINKIHQPFKTELVFTVRAKGKTRALLASANAVFARLHL CCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCEEEEEEEE TTEKYDNPAEPPMFCMLLRKHLEGGIITSITQHGYDRIIVLKVANKDELGDTTEKTLIVE EHHHCCCCCCCHHHHHHHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCCCCCHHHEEEEE IMGRHSNIILVDEKTNTIIDSIKHVRFDQSSYRLVGPGQPYKWPPEQNKLDPLTATEKDV EECCCCCEEEEECCCHHHHHHHHHHEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCE LFALDFHGGKLDKQLVQSFAGLSPLIAAEIVARAKLANRQTLPPAFVSTLAPLKNHEYTL EEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE ELVQGEKDYFSVIHLSHKNGERHVFSSPSALLDRYYYGKAERDRVKQQAFDLERLLKNEY EEECCCCCEEEEEEEECCCCCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH QKNKRKLKKLEQTLQQADEADSYQKQGELLTANIHAVDRGASSVDVIDYYDENGQTITIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEE LDPQKSPAENAQSYFKRYQKAKTARIEVMNQQEKTEQELAYLDSLLAQMASASPRDIEEI ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH REELIEGGYIKKRQQGKKKKKQLDKPQLETYRSSTGIEFLVGKNNRQNDYLTNRLARQDD HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCC IWLHTKDIPGSHVVIRSASPDEETLTEAALVAAFFSKARDSASVPVDYTKIRYVKKPSGA CEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCC KPGYVTYDKQTTLFVTPKEDIVRSLRID CCCEEEECCCEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9534248 [H]