Click here to switch to the map view.

The map label for this gene is 56963888

Identifier: 56963888

GI number: 56963888

Start: 2244466

End: 2245152

Strand: Direct

Name: 56963888

Synonym: ABC2123

Alternate gene names: NA

Gene position: 2244466-2245152 (Clockwise)

Preceding gene: 56963887

Following gene: 56963889

Centisome position: 52.15

GC content: 44.69

Gene sequence:

>687_bases
ATGACAATTTTTCAATTTGCCCTTAAACGAAGTTTTCGCAACAAGACCAACCTTCTATTTTTAACTCTCTTTCCTGTTGC
AGCGATTTTTCTCCCTGCCAGTGAAATATGGCCTTTTCTTCCTTTTGGCTACCATTATTTTGGCGTGCTCATCTTGTTTG
TCAGCATTCGTTTGTCTTCCATGATGTTGGAAGACCGGCTCAAAGGCGTTGTCAAACGTTTAGCTGTTGCACCAATCAGC
CATCTACACTATCTTTGGCAAAACTTGCTTGCCTACATGGTAATTCTCCTTTTCCAATGTGCGCTAGCAGTTGGCGGAGG
CGTTTTGTATGGCCAAGAGTTATACTCGCCCTTTGCGGTGTTCTGTTTGTTCGTTACTTTTAGTTTGACATCCCTTGCTT
TTGCGCTTGCCTGGATTTCCCTGTTTCGCAACAAAGAGACGTCTTTTCTTGTGTTTATGTCCATTGTTGTGTTAATCGCC
CTCCTTGGCGGACTTATTATGCCCATCGAGATGATGCCGGCCGGCTTTGAACGACTCGCTGTCATTTTTCCGACTTATTG
GTTATCGTCAGGTATGAAGTGGATCGCCCTCGGCGGTCAGACAGCAGACATATGGCTCATTCATGGGATGCTCTTGCTCT
ATTCTGTCTGTTTTCTGATCATTGGCAGTATCCGTAAAATCGCTTAG

Upstream 100 bases:

>100_bases
CAGGAAACGTTGCAGAAGTATGGCTTAATGTAAGCATTTTACTCGGAGCAATCATTGTTGCCTTCTTTGTCATGCTTGCG
CTTGGGCGGAGGCGAATGGG

Downstream 100 bases:

>100_bases
GGTCGTTCTGCCGAGCTTTTTATCGACTCCTGGCACTTGAGCTAGGAGTCAGATGTCGTTATAGTTAAAGCTAGAAAAAT
GGTAGGAGGGCTAGCCGATG

Product: multidrug ABC transporter permease

Products: NA

Alternate protein names: Multidrug ABC Transporter Permease

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTIFQFALKRSFRNKTNLLFLTLFPVAAIFLPASEIWPFLPFGYHYFGVLILFVSIRLSSMMLEDRLKGVVKRLAVAPIS
HLHYLWQNLLAYMVILLFQCALAVGGGVLYGQELYSPFAVFCLFVTFSLTSLAFALAWISLFRNKETSFLVFMSIVVLIA
LLGGLIMPIEMMPAGFERLAVIFPTYWLSSGMKWIALGGQTADIWLIHGMLLLYSVCFLIIGSIRKIA

Sequences:

>Translated_228_residues
MTIFQFALKRSFRNKTNLLFLTLFPVAAIFLPASEIWPFLPFGYHYFGVLILFVSIRLSSMMLEDRLKGVVKRLAVAPIS
HLHYLWQNLLAYMVILLFQCALAVGGGVLYGQELYSPFAVFCLFVTFSLTSLAFALAWISLFRNKETSFLVFMSIVVLIA
LLGGLIMPIEMMPAGFERLAVIFPTYWLSSGMKWIALGGQTADIWLIHGMLLLYSVCFLIIGSIRKIA
>Mature_227_residues
TIFQFALKRSFRNKTNLLFLTLFPVAAIFLPASEIWPFLPFGYHYFGVLILFVSIRLSSMMLEDRLKGVVKRLAVAPISH
LHYLWQNLLAYMVILLFQCALAVGGGVLYGQELYSPFAVFCLFVTFSLTSLAFALAWISLFRNKETSFLVFMSIVVLIAL
LGGLIMPIEMMPAGFERLAVIFPTYWLSSGMKWIALGGQTADIWLIHGMLLLYSVCFLIIGSIRKIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25756; Mature: 25624

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFQFALKRSFRNKTNLLFLTLFPVAAIFLPASEIWPFLPFGYHYFGVLILFVSIRLSS
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MMLEDRLKGVVKRLAVAPISHLHYLWQNLLAYMVILLFQCALAVGGGVLYGQELYSPFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FCLFVTFSLTSLAFALAWISLFRNKETSFLVFMSIVVLIALLGGLIMPIEMMPAGFERLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VIFPTYWLSSGMKWIALGGQTADIWLIHGMLLLYSVCFLIIGSIRKIA
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIFQFALKRSFRNKTNLLFLTLFPVAAIFLPASEIWPFLPFGYHYFGVLILFVSIRLSS
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
MMLEDRLKGVVKRLAVAPISHLHYLWQNLLAYMVILLFQCALAVGGGVLYGQELYSPFAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FCLFVTFSLTSLAFALAWISLFRNKETSFLVFMSIVVLIALLGGLIMPIEMMPAGFERLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VIFPTYWLSSGMKWIALGGQTADIWLIHGMLLLYSVCFLIIGSIRKIA
HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA