Click here to switch to the map view.

The map label for this gene is 56963882

Identifier: 56963882

GI number: 56963882

Start: 2238694

End: 2239326

Strand: Direct

Name: 56963882

Synonym: ABC2117

Alternate gene names: NA

Gene position: 2238694-2239326 (Clockwise)

Preceding gene: 56963876

Following gene: 56963885

Centisome position: 52.02

GC content: 46.45

Gene sequence:

>633_bases
ATGCGAAAATGGTTTTTAGGTATTTCGTTGTTTTTTCTTGTTTGCTTGGTCGCAATCGTGTTGTTGTTTGAACAAAATGA
CCGCTTTCGCCAAAATGTTTACAAAACCATTATTGCCGAAAACCAAATTCCTGAAGATTATGTGCCTATATACAAAGAGG
CAGGCGAAGAGTATGGCGTGCCTTGGGAACTGCTTGCTTCCGTTCATCGCGTTGAAACGATCTTTTCAACAATGGATCCG
CTCGAAAGCCCTGTTGGCGCCCTTGGGCATTTTCAATTTATGCCCCGTACATGGGTCGGCTGGTCTTACCCAGGCACTGA
CGACATCGGCAATGTCGCTGAAGATGTTGACATTACGGATACCGATTTAATTGAAGCCCATAACGGATATGGCACTGACG
CGTCAGGTAGCGGCAAAGCCGATCCTTTTGACCTAGCCGACTCCGCCTACTCAGCTGCTCGGTATTTGGCTGACCACGGC
GCACGTGAAGGCAATTATGAAGAGGCGCTTTTCTCTTATAACAAAAGCGAAGATTACGTAGAAGAAGTAATGGGGTACTA
CCACACGTATACAGAGGAAGGGTACGAGCTTATACAACTTCCACTAAACAGGCACAAAGCAGCAGGAACGTAA

Upstream 100 bases:

>100_bases
ATTCCCAAAATCGTCAACATTGAAACGATTCTTTCTATGTTCTTTTTTCAATTGTCATGTTACGATAAGAGGGTAATTTG
TGCAGAAAGAGGCTCGATTC

Downstream 100 bases:

>100_bases
AACGCACACCTCCATTTGTAGGTGTGCGTTTTTTATGAAGCTGTAATCGGATCTTCTTCGACGAGCTTTACTGGAATAGG
CTCCACATAGCCTTCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRKWFLGISLFFLVCLVAIVLLFEQNDRFRQNVYKTIIAENQIPEDYVPIYKEAGEEYGVPWELLASVHRVETIFSTMDP
LESPVGALGHFQFMPRTWVGWSYPGTDDIGNVAEDVDITDTDLIEAHNGYGTDASGSGKADPFDLADSAYSAARYLADHG
AREGNYEEALFSYNKSEDYVEEVMGYYHTYTEEGYELIQLPLNRHKAAGT

Sequences:

>Translated_210_residues
MRKWFLGISLFFLVCLVAIVLLFEQNDRFRQNVYKTIIAENQIPEDYVPIYKEAGEEYGVPWELLASVHRVETIFSTMDP
LESPVGALGHFQFMPRTWVGWSYPGTDDIGNVAEDVDITDTDLIEAHNGYGTDASGSGKADPFDLADSAYSAARYLADHG
AREGNYEEALFSYNKSEDYVEEVMGYYHTYTEEGYELIQLPLNRHKAAGT
>Mature_210_residues
MRKWFLGISLFFLVCLVAIVLLFEQNDRFRQNVYKTIIAENQIPEDYVPIYKEAGEEYGVPWELLASVHRVETIFSTMDP
LESPVGALGHFQFMPRTWVGWSYPGTDDIGNVAEDVDITDTDLIEAHNGYGTDASGSGKADPFDLADSAYSAARYLADHG
AREGNYEEALFSYNKSEDYVEEVMGYYHTYTEEGYELIQLPLNRHKAAGT

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23764; Mature: 23764

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKWFLGISLFFLVCLVAIVLLFEQNDRFRQNVYKTIIAENQIPEDYVPIYKEAGEEYGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PWELLASVHRVETIFSTMDPLESPVGALGHFQFMPRTWVGWSYPGTDDIGNVAEDVDITD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC
TDLIEAHNGYGTDASGSGKADPFDLADSAYSAARYLADHGAREGNYEEALFSYNKSEDYV
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH
EEVMGYYHTYTEEGYELIQLPLNRHKAAGT
HHHHHHHHHHHHHCHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MRKWFLGISLFFLVCLVAIVLLFEQNDRFRQNVYKTIIAENQIPEDYVPIYKEAGEEYGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PWELLASVHRVETIFSTMDPLESPVGALGHFQFMPRTWVGWSYPGTDDIGNVAEDVDITD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCC
TDLIEAHNGYGTDASGSGKADPFDLADSAYSAARYLADHGAREGNYEEALFSYNKSEDYV
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHH
EEVMGYYHTYTEEGYELIQLPLNRHKAAGT
HHHHHHHHHHHHHCHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA