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The map label for this gene is yvrB [H]

Identifier: 56963602

GI number: 56963602

Start: 1954722

End: 1955792

Strand: Direct

Name: yvrB [H]

Synonym: ABC1837

Alternate gene names: 56963602

Gene position: 1954722-1955792 (Clockwise)

Preceding gene: 56963601

Following gene: 56963603

Centisome position: 45.42

GC content: 49.11

Gene sequence:

>1071_bases
TTGTTACCGCAGCGCACATTGCAACGATTCTTAAAAACGCATAAAATCGCCGTTTACGCTGGAGCGATAGCGATCACTCT
GTTTGTAGTGATTGCTGCTGTTCGCTTTGGCAGCGTCGGCCTTTCATTCCCAACGGTTTTCTTCGTCCTTGTCCAAGAAG
GGCTGAACATCCCTCTTGGACAAGAATTAGATCCAGGGCATGTACAAATTATTTTACACATTCGCCTTCCTCGAGTGCTG
TTGGCGCTTTTCGTTGGCGCCTGTTTAGCTGTAGCTGGTGCTGCTTTTCAAGGGCTGTTGCGGAATCCACTTGCAGATCC
TTATACGTTAGGCGTTTCCTCTGGAGCTGCGCTTGGGGCAGTCGCCGTGCTATTCTTTCAATTGGCCTTTTTCGGAGCGT
GGACATTGCCGCTTGTCGCAATGGGATGTGGCTTTTTGACGTTAGTGGCTGTCTTGTATTTCACAAAGATCCTTTCCCCA
TCTTTGCAAAATGAAACCGTTGTGCTTGCAGGGATCATTGCCAGTGCTTTTCTAGGGGCAGGCCTTTCGCTAATGATAGC
CATGTCGCAAGATGAACTACGGCAAGTCATCAATTGGTTGATGGGCAGCGTTGCAATGAGAGGTTGGGCCCATATTGGCT
TGTTGCTGCCGTTTTTTGTGGGTGGGTTCACATTGTTGTTTTTTTGTAGGAATGAGTTGAATGCTTTTATGTATGGAGAA
GAAACGGCGCAGCATTTAGGCGTTTATGTGGTACAGAAAAAATACATCATCCTTATTGCCGCGACGATTTTAACAGGAAG
TGCCGTTGCCGTCTCGGGTACAATTGGCTTCGTTGGTCTTGTTGTCCCCCATATGTGCCGAACGCTTTTTGGAAGCGACT
ATTCACACTTGCTGCCCCTGGCAGCCATCGTTGGCGGCAGTTTTTTAGTAGTATGCGACATGGCAGCCCGTGTCGTCGTT
TCTCCTGCAGAACTGCCAATTGGCGTTGTAACCGCGCTCATTGGTGCCCCAACCTTTGCGTGGATGCTATATAGAAGCCA
GCGAGCGAAAAGGAGGGACCAGGCGACATGA

Upstream 100 bases:

>100_bases
TCAAGTGGATGTGGGCAATGCAGACGGATGCAGCGTTTGTCGGAATCGACAAGGCGCTGCATTTGCCGTTAGGAAGAAAA
ATGGCAGGAGGAACGCTACC

Downstream 100 bases:

>100_bases
TTGCGGCAAATAACCTTTCCGTTAACCGGGGGGGGCGTCTAATCCTCGATCAAGTAAGTTTCCAAGCAAAGAAAGGGCGA
ATGCTTGGCATACTTGGAGC

Product: ferric ion ABC transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MLPQRTLQRFLKTHKIAVYAGAIAITLFVVIAAVRFGSVGLSFPTVFFVLVQEGLNIPLGQELDPGHVQIILHIRLPRVL
LALFVGACLAVAGAAFQGLLRNPLADPYTLGVSSGAALGAVAVLFFQLAFFGAWTLPLVAMGCGFLTLVAVLYFTKILSP
SLQNETVVLAGIIASAFLGAGLSLMIAMSQDELRQVINWLMGSVAMRGWAHIGLLLPFFVGGFTLLFFCRNELNAFMYGE
ETAQHLGVYVVQKKYIILIAATILTGSAVAVSGTIGFVGLVVPHMCRTLFGSDYSHLLPLAAIVGGSFLVVCDMAARVVV
SPAELPIGVVTALIGAPTFAWMLYRSQRAKRRDQAT

Sequences:

>Translated_356_residues
MLPQRTLQRFLKTHKIAVYAGAIAITLFVVIAAVRFGSVGLSFPTVFFVLVQEGLNIPLGQELDPGHVQIILHIRLPRVL
LALFVGACLAVAGAAFQGLLRNPLADPYTLGVSSGAALGAVAVLFFQLAFFGAWTLPLVAMGCGFLTLVAVLYFTKILSP
SLQNETVVLAGIIASAFLGAGLSLMIAMSQDELRQVINWLMGSVAMRGWAHIGLLLPFFVGGFTLLFFCRNELNAFMYGE
ETAQHLGVYVVQKKYIILIAATILTGSAVAVSGTIGFVGLVVPHMCRTLFGSDYSHLLPLAAIVGGSFLVVCDMAARVVV
SPAELPIGVVTALIGAPTFAWMLYRSQRAKRRDQAT
>Mature_356_residues
MLPQRTLQRFLKTHKIAVYAGAIAITLFVVIAAVRFGSVGLSFPTVFFVLVQEGLNIPLGQELDPGHVQIILHIRLPRVL
LALFVGACLAVAGAAFQGLLRNPLADPYTLGVSSGAALGAVAVLFFQLAFFGAWTLPLVAMGCGFLTLVAVLYFTKILSP
SLQNETVVLAGIIASAFLGAGLSLMIAMSQDELRQVINWLMGSVAMRGWAHIGLLLPFFVGGFTLLFFCRNELNAFMYGE
ETAQHLGVYVVQKKYIILIAATILTGSAVAVSGTIGFVGLVVPHMCRTLFGSDYSHLLPLAAIVGGSFLVVCDMAARVVV
SPAELPIGVVTALIGAPTFAWMLYRSQRAKRRDQAT

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=282, Percent_Identity=39.0070921985816, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788004, Length=292, Percent_Identity=35.6164383561644, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790741, Length=290, Percent_Identity=31.7241379310345, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1786805, Length=291, Percent_Identity=36.7697594501718, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786347, Length=275, Percent_Identity=32, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1786804, Length=322, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38027; Mature: 38027

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPQRTLQRFLKTHKIAVYAGAIAITLFVVIAAVRFGSVGLSFPTVFFVLVQEGLNIPLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
QELDPGHVQIILHIRLPRVLLALFVGACLAVAGAAFQGLLRNPLADPYTLGVSSGAALGA
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH
VAVLFFQLAFFGAWTLPLVAMGCGFLTLVAVLYFTKILSPSLQNETVVLAGIIASAFLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
GLSLMIAMSQDELRQVINWLMGSVAMRGWAHIGLLLPFFVGGFTLLFFCRNELNAFMYGE
CHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
ETAQHLGVYVVQKKYIILIAATILTGSAVAVSGTIGFVGLVVPHMCRTLFGSDYSHLLPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAIVGGSFLVVCDMAARVVVSPAELPIGVVTALIGAPTFAWMLYRSQRAKRRDQAT
HHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLPQRTLQRFLKTHKIAVYAGAIAITLFVVIAAVRFGSVGLSFPTVFFVLVQEGLNIPLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
QELDPGHVQIILHIRLPRVLLALFVGACLAVAGAAFQGLLRNPLADPYTLGVSSGAALGA
CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHH
VAVLFFQLAFFGAWTLPLVAMGCGFLTLVAVLYFTKILSPSLQNETVVLAGIIASAFLGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
GLSLMIAMSQDELRQVINWLMGSVAMRGWAHIGLLLPFFVGGFTLLFFCRNELNAFMYGE
CHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
ETAQHLGVYVVQKKYIILIAATILTGSAVAVSGTIGFVGLVVPHMCRTLFGSDYSHLLPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAIVGGSFLVVCDMAARVVVSPAELPIGVVTALIGAPTFAWMLYRSQRAKRRDQAT
HHHHCCCHHHHHHHHHHHHCCCHHCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]