| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
Click here to switch to the map view.
The map label for this gene is spoVAD [H]
Identifier: 56963562
GI number: 56963562
Start: 1913738
End: 1914742
Strand: Direct
Name: spoVAD [H]
Synonym: ABC1797
Alternate gene names: 56963562
Gene position: 1913738-1914742 (Clockwise)
Preceding gene: 56963561
Following gene: 56963563
Centisome position: 44.47
GC content: 47.56
Gene sequence:
>1005_bases ATGGGCCTTTCACATCGGACAATGACATTCTCAAATCCAGTGTATATCCAATCGAGCGGCACGGCAGTCGGCCCAAAAGA AGGAGCAGGGCCGCTGGCTGGCTCTTTTGATTACCGATACACGGATATTTATTGTGATGAAAAAAGTTGGGAAATGGCAG AACGTGCATTGATGAAACAAGCGATTAAACAATGTTTAACCAAAAACCATTTATCGATAGACTCTGTTGATTTGTTTGTT GCCGGAGATTTAAGCAACCAGACGACTGCTTCTAGTTTTGTCGCCCGTGATTTGCAATTGCCATACATCGGTACATATTC AGCATGCGCCACCTCTGTTGAAACGCTAATCATTAGCGGCGTATGGGTGTCTAGCGGGTTAGCTGATTTGGTGCTCGCAG CGGCAAGCAGCCATTACGGCGCCTGTGAAAAGCAATTCCGCTATCCGACTGAATTTGCAGTCCAAAAACCAGAAACGGCT CAGACAACTGTAACTGGAGCAGGCGCTGTTCTACTGGGGAAGAAGCGCACGGAAATTCAATTAACGGAAGCAACGATTGG CCGTGTCCAAGACCTGGGCATCACTGATCCGATGAGTTTAGGGGCAGCGATGGCACCAGCTGCAGCAGAGGTGACAATCG GTCATTTGCACAAAACGAATCAGCAAGTAAGTGACTTTGATTTAATTGTGACAGGTGATTTAGCGATATCTGGAAGTGAA ATTTACCGTAAACTATTGCGAGAGCAAGGCATTTATATAACCGGGCGCTATGAGGATTGTGGTGTTATGATGTACCACTC TGAGCAACAAGTACTAGCCGGGGGGAGTGGCGCAGGTTGTTCCGCATCTGTTGTATATGGGCATATTTACCATCGCCTTC TCGCTGGGGAACTAAAACGTGTCCTTGTCGTTGCCACTGGGGCCCTTTTAAGCTCGATGACCGTTTTGCAAAAGCAATCG ATCCCAGCAATTGCCCATGCAATTGTCCTGGAAAGGAGGAGTTAG
Upstream 100 bases:
>100_bases TTATTGGCCCGGTGCTTGTTTTCGGCATCAGTACTGCCTACCTCGTCAGTTTTTCCAGACTGTTGATCCGCATGATTTTA CACTAGAAAAGAGGGAAACT
Downstream 100 bases:
>100_bases CAAATGGAGTTTTTATGGGCGTTTTTAGTCGGTGGAGCCATTTGTTTAATCGGTCAGGTTTTGCTTGACGCCGCAAAGCT GACCCCTGTTCAAATGCTCG
Product: stage V sporulation protein AD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFV AGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETA QTTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQS IPAIAHAIVLERRS
Sequences:
>Translated_334_residues MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFV AGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETA QTTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQS IPAIAHAIVLERRS >Mature_333_residues GLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQAIKQCLTKNHLSIDSVDLFVA GDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISGVWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQ TTVTGAGAVLLGKKRTEIQLTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSEI YRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKRVLVVATGALLSSMTVLQKQSI PAIAHAIVLERRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010894 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF07451 SpoVAD [H]
EC number: NA
Molecular weight: Translated: 35751; Mature: 35620
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQ CCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH AIKQCLTKNHLSIDSVDLFVAGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISG HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC VWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQTTVTGAGAVLLGKKRTEIQ HHHHCCHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEE LTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE EEHHHHHHHHHCCCCCCHHHCHHHCCCHHEEEEEHHHHCCCCCCCEEEEEECCEEECHHH IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKR HHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VLVVATGALLSSMTVLQKQSIPAIAHAIVLERRS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC >Mature Secondary Structure GLSHRTMTFSNPVYIQSSGTAVGPKEGAGPLAGSFDYRYTDIYCDEKSWEMAERALMKQ CCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHH AIKQCLTKNHLSIDSVDLFVAGDLSNQTTASSFVARDLQLPYIGTYSACATSVETLIISG HHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEC VWVSSGLADLVLAAASSHYGACEKQFRYPTEFAVQKPETAQTTVTGAGAVLLGKKRTEIQ HHHHCCHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEE LTEATIGRVQDLGITDPMSLGAAMAPAAAEVTIGHLHKTNQQVSDFDLIVTGDLAISGSE EEHHHHHHHHHCCCCCCHHHCHHHCCCHHEEEEEHHHHCCCCCCCEEEEEECCEEECHHH IYRKLLREQGIYITGRYEDCGVMMYHSEQQVLAGGSGAGCSASVVYGHIYHRLLAGELKR HHHHHHHHCCCEEEEEECCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH VLVVATGALLSSMTVLQKQSIPAIAHAIVLERRS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]