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The map label for this gene is yjeA [H]

Identifier: 56963556

GI number: 56963556

Start: 1909129

End: 1909911

Strand: Direct

Name: yjeA [H]

Synonym: ABC1791

Alternate gene names: 56963556

Gene position: 1909129-1909911 (Clockwise)

Preceding gene: 56963555

Following gene: 56963557

Centisome position: 44.36

GC content: 44.57

Gene sequence:

>783_bases
TTGAGAGGGGTTTTTCACGTGAACAAGAAATGGCTAACCGTTGTTCTGTTTCTTGGCGTTAGTTCACTTCTTTTTGGCGG
AAGATTTAGCGATGCCCTTTCTTATCAAGCGATTGAAAGGGATGGCCCAGCGCTTGTGCAAACGACTGCCCTTACACAGA
TCGAACGTGAAAAAATTCAATTTCAAGGGCCAAATGACGAAAAAAGGCTCGCGTTAACATTTGACGATGGCCCTGATCCC
GTTTACACAGAACGTCTACTTGATTTATTAAAGGAAGAAAATATCAAAGCCACTTTTTTTGTACTAGGTTATAAAGCAAA
GCAACATCCGTCGCTCTTAAAACGAATGGTGGCAGAAGGGCATAGCATCGGCAATCACAGCTTTACCCATCAAGAGTTGA
CCAAGCTTGAACAAAGCGAGGTGCTAGACGAAGTGGAACAGACACAAGCGGTCATTGAAGAAGCAACTGGCGTCACTACC
CATTTGGTGAGGGCCCCCTATGGGAGCGTGAATGACATGGTTGTCAAAACACTCACAAGAAAAAGTTACCACCTAATTGG
TTGGAGCATTGATTCCTTAGATTGGCAATACCAACTGCCATTTTCGATTGCGATGAATGTAGTCGACGATGCCCATTCTG
GTGGAATCATCCTTCATCATGACGGCACGGCTACAAGCTACCAACTGTTTGATGATCTGCCGGCAGAAATTGAATGGTTG
AAAGAAAAAGGCTATACATTTGTAACGGTCCCCGAGCTGTTGCATTTGCCCGAAGCAAGTTAA

Upstream 100 bases:

>100_bases
GCTGCCTTAACAATCGCAATGGGATGGTTTTACTGGGGGCCCGTTTAATCGCCCGTGCATAAATGATTTATTCTCCTCTC
ATACTAGGAAGATCGACTAG

Downstream 100 bases:

>100_bases
GCCAATGGCTTGACTTGCTTTTTTGTTCCTTTTCAAGATGGTTCGGCAAAAACGGGAACGGAGTCAGCGTTTTAAATATT
GTTTGGGCAAATGTATAACC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRGVFHVNKKWLTVVLFLGVSSLLFGGRFSDALSYQAIERDGPALVQTTALTQIEREKIQFQGPNDEKRLALTFDDGPDP
VYTERLLDLLKEENIKATFFVLGYKAKQHPSLLKRMVAEGHSIGNHSFTHQELTKLEQSEVLDEVEQTQAVIEEATGVTT
HLVRAPYGSVNDMVVKTLTRKSYHLIGWSIDSLDWQYQLPFSIAMNVVDDAHSGGIILHHDGTATSYQLFDDLPAEIEWL
KEKGYTFVTVPELLHLPEAS

Sequences:

>Translated_260_residues
MRGVFHVNKKWLTVVLFLGVSSLLFGGRFSDALSYQAIERDGPALVQTTALTQIEREKIQFQGPNDEKRLALTFDDGPDP
VYTERLLDLLKEENIKATFFVLGYKAKQHPSLLKRMVAEGHSIGNHSFTHQELTKLEQSEVLDEVEQTQAVIEEATGVTT
HLVRAPYGSVNDMVVKTLTRKSYHLIGWSIDSLDWQYQLPFSIAMNVVDDAHSGGIILHHDGTATSYQLFDDLPAEIEWL
KEKGYTFVTVPELLHLPEAS
>Mature_260_residues
MRGVFHVNKKWLTVVLFLGVSSLLFGGRFSDALSYQAIERDGPALVQTTALTQIEREKIQFQGPNDEKRLALTFDDGPDP
VYTERLLDLLKEENIKATFFVLGYKAKQHPSLLKRMVAEGHSIGNHSFTHQELTKLEQSEVLDEVEQTQAVIEEATGVTT
HLVRAPYGSVNDMVVKTLTRKSYHLIGWSIDSLDWQYQLPFSIAMNVVDDAHSGGIILHHDGTATSYQLFDDLPAEIEWL
KEKGYTFVTVPELLHLPEAS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=169, Percent_Identity=34.9112426035503, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323338, Length=192, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 29296; Mature: 29296

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVFHVNKKWLTVVLFLGVSSLLFGGRFSDALSYQAIERDGPALVQTTALTQIEREKIQ
CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEE
FQGPNDEKRLALTFDDGPDPVYTERLLDLLKEENIKATFFVLGYKAKQHPSLLKRMVAEG
ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCC
HSIGNHSFTHQELTKLEQSEVLDEVEQTQAVIEEATGVTTHLVRAPYGSVNDMVVKTLTR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
KSYHLIGWSIDSLDWQYQLPFSIAMNVVDDAHSGGIILHHDGTATSYQLFDDLPAEIEWL
CCEEEEEEEECCCCEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCHHHHHH
KEKGYTFVTVPELLHLPEAS
HHCCCEEEEHHHHHCCCCCC
>Mature Secondary Structure
MRGVFHVNKKWLTVVLFLGVSSLLFGGRFSDALSYQAIERDGPALVQTTALTQIEREKIQ
CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHEE
FQGPNDEKRLALTFDDGPDPVYTERLLDLLKEENIKATFFVLGYKAKQHPSLLKRMVAEG
ECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCC
HSIGNHSFTHQELTKLEQSEVLDEVEQTQAVIEEATGVTTHLVRAPYGSVNDMVVKTLTR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHH
KSYHLIGWSIDSLDWQYQLPFSIAMNVVDDAHSGGIILHHDGTATSYQLFDDLPAEIEWL
CCEEEEEEEECCCCEEEECCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCHHHHHH
KEKGYTFVTVPELLHLPEAS
HHCCCEEEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]