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The map label for this gene is yqjE [H]

Identifier: 56963518

GI number: 56963518

Start: 1875769

End: 1876881

Strand: Direct

Name: yqjE [H]

Synonym: ABC1753

Alternate gene names: 56963518

Gene position: 1875769-1876881 (Clockwise)

Preceding gene: 56963517

Following gene: 56963519

Centisome position: 43.58

GC content: 44.12

Gene sequence:

>1113_bases
GTGTATTCAAGAGTAGTCGAAGAGTTTTTGGAACTTGTGCAAATCGATTCTGAAACAAAACATGAAGAAAAAATGGCAAG
TGTTTTAAAAGAAAAATTCACATCACTAGGCTTAGACGTAGTCGAAGATGATGCAAAAGAAAGAACGGGCCATGGCGCAG
GGAATTTAATTTGTACGTTGCCTGAAACAAGCAGCGGATTTGATCCACTTTATTTCATTGCCCATATGGATACAGTTGGC
CCAGGAAAAGGGATTCAACCAATTGTAGAAAATGGCTATATTCAAACGGACGGGACAACCATTTTAGGAGCAGACGATAA
AGCGGGAATTGCGGCAATGTTAGAAGCAACTCGTGTTCTGCAAGCATCGAAAGAACCACATGGCCAAATTCAGTTTGTCA
TTACTGTAGGCGAAGAGGCTGGCTTAGTTGGTGCGAAAGCGTTGGCCAAAGATGCGATTTCTGCTTCTTATGGCTATGCT
CTTGATAGCGACGGAGAAGTAGGGGGCATGATCACGTCAGCGCCTTCGCAAGCAAAAATCTTTGCAAAAGTATATGGCAA
AACGGCTCATGCTGGCGTTGAACCTGAAAAAGGAATATCAGCTATTGCAGTTGCTTCCAAAGCTGTTTCAAAAATGCCGT
TAGGAAGGATTGACGCAGACACGACAGCCAATATCGGCCGATTTGAAGGCGGTACGCAAACCAATATTGTTTGCGACGTT
GTTACGATCACCGCCGAAGCCCGTTCCCTTGTAGAAGAGAAGCTAAAACAGCAAGTTGAAGCGATGAAACAAGCTTTTGA
ACAAGCCGCATTAGAAATGAGCACAAGTTGCGATGTACAAGTGACATACAGTTATCCTGGCTATCGGGAGCCAGAGGACA
CAAAAGTTGTTCAGACTGCAATTCGCGCAATTAAAGCATGTGGGTTGACGCCTATGACTACTTCAAGTGGGGGAGGCAGT
GATGCCAACATCATTTCTGGATACGGCATCCCGACCATTAACTTATCAGTAGGTTATGAAGGGATTCATACAACAAGCGA
ACGAATTTCGATTGAAGCGCTTGAAAATACAGCAAAACTTGTCGTAGAAATTGCCCGCTCAGCTAGGAAATGA

Upstream 100 bases:

>100_bases
GGCGGTTTGCTCGTTGAACTTTGTGAGGGAAAAACGTGAAATCAATTAGCAAATCAGCTATAGTAAAAAGGAAATGGAAA
AGCAGCGATGGAGTGATGAC

Downstream 100 bases:

>100_bases
AATAAAAAAAGAACGGGAGTAGAGAATGGACTTGATCTCTACTCCTATTTTTTCATGGATTGTTGGTGAGGATCCATCAA
GCAGAAAACGCAGAGAGGGG

Product: tripeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MYSRVVEEFLELVQIDSETKHEEKMASVLKEKFTSLGLDVVEDDAKERTGHGAGNLICTLPETSSGFDPLYFIAHMDTVG
PGKGIQPIVENGYIQTDGTTILGADDKAGIAAMLEATRVLQASKEPHGQIQFVITVGEEAGLVGAKALAKDAISASYGYA
LDSDGEVGGMITSAPSQAKIFAKVYGKTAHAGVEPEKGISAIAVASKAVSKMPLGRIDADTTANIGRFEGGTQTNIVCDV
VTITAEARSLVEEKLKQQVEAMKQAFEQAALEMSTSCDVQVTYSYPGYREPEDTKVVQTAIRAIKACGLTPMTTSSGGGS
DANIISGYGIPTINLSVGYEGIHTTSERISIEALENTAKLVVEIARSARK

Sequences:

>Translated_370_residues
MYSRVVEEFLELVQIDSETKHEEKMASVLKEKFTSLGLDVVEDDAKERTGHGAGNLICTLPETSSGFDPLYFIAHMDTVG
PGKGIQPIVENGYIQTDGTTILGADDKAGIAAMLEATRVLQASKEPHGQIQFVITVGEEAGLVGAKALAKDAISASYGYA
LDSDGEVGGMITSAPSQAKIFAKVYGKTAHAGVEPEKGISAIAVASKAVSKMPLGRIDADTTANIGRFEGGTQTNIVCDV
VTITAEARSLVEEKLKQQVEAMKQAFEQAALEMSTSCDVQVTYSYPGYREPEDTKVVQTAIRAIKACGLTPMTTSSGGGS
DANIISGYGIPTINLSVGYEGIHTTSERISIEALENTAKLVVEIARSARK
>Mature_370_residues
MYSRVVEEFLELVQIDSETKHEEKMASVLKEKFTSLGLDVVEDDAKERTGHGAGNLICTLPETSSGFDPLYFIAHMDTVG
PGKGIQPIVENGYIQTDGTTILGADDKAGIAAMLEATRVLQASKEPHGQIQFVITVGEEAGLVGAKALAKDAISASYGYA
LDSDGEVGGMITSAPSQAKIFAKVYGKTAHAGVEPEKGISAIAVASKAVSKMPLGRIDADTTANIGRFEGGTQTNIVCDV
VTITAEARSLVEEKLKQQVEAMKQAFEQAALEMSTSCDVQVTYSYPGYREPEDTKVVQTAIRAIKACGLTPMTTSSGGGS
DANIISGYGIPTINLSVGYEGIHTTSERISIEALENTAKLVVEIARSARK

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=416, Percent_Identity=28.3653846153846, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 39104; Mature: 39104

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRVVEEFLELVQIDSETKHEEKMASVLKEKFTSLGLDVVEDDAKERTGHGAGNLICTL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCEEEEC
PETSSGFDPLYFIAHMDTVGPGKGIQPIVENGYIQTDGTTILGADDKAGIAAMLEATRVL
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCEEEECCCEEECCCCCCHHHHHHHHHHHH
QASKEPHGQIQFVITVGEEAGLVGAKALAKDAISASYGYALDSDGEVGGMITSAPSQAKI
HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCHHHH
FAKVYGKTAHAGVEPEKGISAIAVASKAVSKMPLGRIDADTTANIGRFEGGTQTNIVCDV
HHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
VTITAEARSLVEEKLKQQVEAMKQAFEQAALEMSTSCDVQVTYSYPGYREPEDTKVVQTA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
IRAIKACGLTPMTTSSGGGSDANIISGYGIPTINLSVGYEGIHTTSERISIEALENTAKL
HHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHEEHHHHHHHHHH
VVEIARSARK
HHHHHHHHCC
>Mature Secondary Structure
MYSRVVEEFLELVQIDSETKHEEKMASVLKEKFTSLGLDVVEDDAKERTGHGAGNLICTL
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCEEEEC
PETSSGFDPLYFIAHMDTVGPGKGIQPIVENGYIQTDGTTILGADDKAGIAAMLEATRVL
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCEEEECCCEEECCCCCCHHHHHHHHHHHH
QASKEPHGQIQFVITVGEEAGLVGAKALAKDAISASYGYALDSDGEVGGMITSAPSQAKI
HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEECCCCHHHH
FAKVYGKTAHAGVEPEKGISAIAVASKAVSKMPLGRIDADTTANIGRFEGGTQTNIVCDV
HHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
VTITAEARSLVEEKLKQQVEAMKQAFEQAALEMSTSCDVQVTYSYPGYREPEDTKVVQTA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
IRAIKACGLTPMTTSSGGGSDANIISGYGIPTINLSVGYEGIHTTSERISIEALENTAKL
HHHHHHCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHEEHHHHHHHHHH
VVEIARSARK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]