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The map label for this gene is ccpN [H]

Identifier: 56963451

GI number: 56963451

Start: 1815017

End: 1815661

Strand: Direct

Name: ccpN [H]

Synonym: ABC1686

Alternate gene names: 56963451

Gene position: 1815017-1815661 (Clockwise)

Preceding gene: 56963450

Following gene: 56963452

Centisome position: 42.17

GC content: 44.96

Gene sequence:

>645_bases
GTGAGTCCAATCGAATTATCAACTAGGCAACAGCAAATCGTCGATATTGTAAAGGAAAATGGCCCAATTACCGGCGAACA
CATTGCAGAACGTCTATCCTTAACGAGGGCGACTCTACGTCCAGACTTGGCTATTTTAACAATGGCCGGGTTCCTGGACG
CCCGGCCTCGGGTAGGCTACTTTTATACGGGGAAAAGTGAAAGCCCCGTTCTTGCCGATAAACTCCAGGAAATCAAAGTT
CACCATTATCAATCGAGGCCCGTTTTAATTGAGCAATCAGCTTCTGTATACGAAGCGATTTGCACGATGTTCTTAGAAGA
TGTAGGCACACTTTTTATTGTTGATAGCGATGCAACATTGGTTGGAGTCGCTTCTCGAAAAGACTTGCTACGGGCAAGCA
TGGGCGGACAGTCGATTGAGTCTATTCCTGTGAGTGTCATTATGACGCGAATGCCAAACATTACGATGTGTGAAAAGGAT
GATTCGGTAATTGAAGTCGCACAAAAGCTCATCTCCCGGCAAATTGATGGATTGCCAATTGTAAAAAAAGTAGACACTGG
ATCAGGTTTCGAAGTGGTGGGGCGTATTACCAAAACCAATATTACTCAGCTGCTTGTTGATCTAGCCAGCAAAGACGGAA
TGTAA

Upstream 100 bases:

>100_bases
TGCGCTGCTTGACCGATTGGCGAAATCAATCCAGTCCTATGCTGATTTTCAAAAGATCGTCTTCTCGGCCTAAGATTATT
GGCACTGGCTTAAAAAAGAG

Downstream 100 bases:

>100_bases
CTTCAAAAGAAAAGGGGCGCGCTTATGACAAACGACACAGAACGCCTAGTGGTTTACATTGTTTCCGATTCCGTAGGGGA
AACAGCCGAGCTTGTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Catabolite control protein N; Control catabolite protein of gluconeogenesis [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSPIELSTRQQQIVDIVKENGPITGEHIAERLSLTRATLRPDLAILTMAGFLDARPRVGYFYTGKSESPVLADKLQEIKV
HHYQSRPVLIEQSASVYEAICTMFLEDVGTLFIVDSDATLVGVASRKDLLRASMGGQSIESIPVSVIMTRMPNITMCEKD
DSVIEVAQKLISRQIDGLPIVKKVDTGSGFEVVGRITKTNITQLLVDLASKDGM

Sequences:

>Translated_214_residues
MSPIELSTRQQQIVDIVKENGPITGEHIAERLSLTRATLRPDLAILTMAGFLDARPRVGYFYTGKSESPVLADKLQEIKV
HHYQSRPVLIEQSASVYEAICTMFLEDVGTLFIVDSDATLVGVASRKDLLRASMGGQSIESIPVSVIMTRMPNITMCEKD
DSVIEVAQKLISRQIDGLPIVKKVDTGSGFEVVGRITKTNITQLLVDLASKDGM
>Mature_213_residues
SPIELSTRQQQIVDIVKENGPITGEHIAERLSLTRATLRPDLAILTMAGFLDARPRVGYFYTGKSESPVLADKLQEIKVH
HYQSRPVLIEQSASVYEAICTMFLEDVGTLFIVDSDATLVGVASRKDLLRASMGGQSIESIPVSVIMTRMPNITMCEKDD
SVIEVAQKLISRQIDGLPIVKKVDTGSGFEVVGRITKTNITQLLVDLASKDGM

Specific function: Transcription repressor that binds to the promoter of gapB and pckA genes, preventing their expression. Acts as a regulator for catabolite repression of gluconeogenic genes [H]

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR016842
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 23462; Mature: 23330

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIELSTRQQQIVDIVKENGPITGEHIAERLSLTRATLRPDLAILTMAGFLDARPRVGY
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCE
FYTGKSESPVLADKLQEIKVHHYQSRPVLIEQSASVYEAICTMFLEDVGTLFIVDSDATL
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCEE
VGVASRKDLLRASMGGQSIESIPVSVIMTRMPNITMCEKDDSVIEVAQKLISRQIDGLPI
EEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCE
VKKVDTGSGFEVVGRITKTNITQLLVDLASKDGM
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPIELSTRQQQIVDIVKENGPITGEHIAERLSLTRATLRPDLAILTMAGFLDARPRVGY
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCE
FYTGKSESPVLADKLQEIKVHHYQSRPVLIEQSASVYEAICTMFLEDVGTLFIVDSDATL
EEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEEECCCEE
VGVASRKDLLRASMGGQSIESIPVSVIMTRMPNITMCEKDDSVIEVAQKLISRQIDGLPI
EEEHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCE
VKKVDTGSGFEVVGRITKTNITQLLVDLASKDGM
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]