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The map label for this gene is glyQ

Identifier: 56963449

GI number: 56963449

Start: 1812028

End: 1812915

Strand: Direct

Name: glyQ

Synonym: ABC1684

Alternate gene names: 56963449

Gene position: 1812028-1812915 (Clockwise)

Preceding gene: 56963448

Following gene: 56963450

Centisome position: 42.1

GC content: 44.71

Gene sequence:

>888_bases
ATGAATGTACAAACAATGATTTTAACGCTCCAATCATTCTGGGCGAAACAAAATTGCATTATTTTAAATGCGTATGACAC
CGAAAAAGGGGCGGGCACGATGAGCCCCCATACGTTGTTGCGCACCATTGGCCCAGAGCCTTGGAATGTTGCGTATGTGG
AGCCATCCCGACGTCCTGCTGATGGGCGTTATGGTGAAAACCCGAACCGGCTTTACCAACACCACCAGTTTCAAGTCATT
ATGAAGCCGTCTCCATTGAACATCCAAGAGTTATATTTGGATAGTCTTCGGGCATTAGGCATCGATCCTTTAAAACATGA
CATTCGGTTCGTAGAAGACAACTGGGAAAACCCAACGCTCGGGTGTGCGGGCCTCGGCTGGGAAGTATGGCTAGATGGGA
TGGAAATTACCCAATTTACGTATTTCCAGCAAGTAGGCGGCATGGAGGCCAATCCTGTTTCTGCAGAGATTACTTATGGA
TTAGAACGATTGGCCACATATATACAAGATAAAGAAAATGTATTTGACTTGGAGTGGGTCGAAGGGTTCACCTATGGCGA
TATCTTTTTACAGCCAGAGTATGAACATTCTACGTATACATTCGAAGTTTCTAATGTAGATATGTTGTTTGATTTATTTT
CTACTTATGAAAAAGAAGCAGAAAGAGCGCTAGCCCGCGATCTTGTTTTTCCTGCGTATGACTATATTTTAAAATGCTCC
CATAGCTTTAACTTGCTTGATGCTCGGGGCGCCATTTCCGTAACAGAAAGAACCGGCTATATTGCCCGGGTTCGCACACT
CGCTCGAAAAGCGGCGCGCAAGTACTATGAAGAGAGAGAAAAGCTTGGCTTTCCTATGCTTAAAAAGGAGGACGCCCACG
ATGAATAA

Upstream 100 bases:

>100_bases
TTAATAAGTAGGGTGGAACCGCGGGTGAACCTCGTCCCTACGCCAATAGGCGTAGGGGCGCTTTTTTGTCTTCTACGCTG
AAAAAGGAGGAAGTTGATCA

Downstream 100 bases:

>100_bases
GCCATTTTTACTTGAACTAGGATTGGAGGAGTTACCGGCTCGTTTTGTTACGCCTTCCATTACACAGCTCGCTGAAAAAG
TGCAAGCATGGCTTGATGAT

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNVQTMILTLQSFWAKQNCIILNAYDTEKGAGTMSPHTLLRTIGPEPWNVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
MKPSPLNIQELYLDSLRALGIDPLKHDIRFVEDNWENPTLGCAGLGWEVWLDGMEITQFTYFQQVGGMEANPVSAEITYG
LERLATYIQDKENVFDLEWVEGFTYGDIFLQPEYEHSTYTFEVSNVDMLFDLFSTYEKEAERALARDLVFPAYDYILKCS
HSFNLLDARGAISVTERTGYIARVRTLARKAARKYYEEREKLGFPMLKKEDAHDE

Sequences:

>Translated_295_residues
MNVQTMILTLQSFWAKQNCIILNAYDTEKGAGTMSPHTLLRTIGPEPWNVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
MKPSPLNIQELYLDSLRALGIDPLKHDIRFVEDNWENPTLGCAGLGWEVWLDGMEITQFTYFQQVGGMEANPVSAEITYG
LERLATYIQDKENVFDLEWVEGFTYGDIFLQPEYEHSTYTFEVSNVDMLFDLFSTYEKEAERALARDLVFPAYDYILKCS
HSFNLLDARGAISVTERTGYIARVRTLARKAARKYYEEREKLGFPMLKKEDAHDE
>Mature_295_residues
MNVQTMILTLQSFWAKQNCIILNAYDTEKGAGTMSPHTLLRTIGPEPWNVAYVEPSRRPADGRYGENPNRLYQHHQFQVI
MKPSPLNIQELYLDSLRALGIDPLKHDIRFVEDNWENPTLGCAGLGWEVWLDGMEITQFTYFQQVGGMEANPVSAEITYG
LERLATYIQDKENVFDLEWVEGFTYGDIFLQPEYEHSTYTFEVSNVDMLFDLFSTYEKEAERALARDLVFPAYDYILKCS
HSFNLLDARGAISVTERTGYIARVRTLARKAARKYYEEREKLGFPMLKKEDAHDE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=293, Percent_Identity=64.5051194539249, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_BACSK (Q5WHD6)

Other databases:

- EMBL:   AP006627
- RefSeq:   YP_175180.1
- HSSP:   Q9WY59
- ProteinModelPortal:   Q5WHD6
- SMR:   Q5WHD6
- STRING:   Q5WHD6
- EnsemblBacteria:   EBBACT00000046788
- GeneID:   3204538
- GenomeReviews:   AP006627_GR
- KEGG:   bcl:ABC1684
- NMPDR:   fig|66692.3.peg.67
- eggNOG:   COG0752
- GeneTree:   EBGT00050000002437
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   BCLA66692:ABC1684-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34156; Mature: 34156

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVQTMILTLQSFWAKQNCIILNAYDTEKGAGTMSPHTLLRTIGPEPWNVAYVEPSRRPA
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC
DGRYGENPNRLYQHHQFQVIMKPSPLNIQELYLDSLRALGIDPLKHDIRFVEDNWENPTL
CCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGMEANPVSAEITYGLERLATYIQDKENVFDLEWV
EEECCCHHHEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHH
EGFTYGDIFLQPEYEHSTYTFEVSNVDMLFDLFSTYEKEAERALARDLVFPAYDYILKCS
CCCEECEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HSFNLLDARGAISVTERTGYIARVRTLARKAARKYYEEREKLGFPMLKKEDAHDE
CCCCEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVQTMILTLQSFWAKQNCIILNAYDTEKGAGTMSPHTLLRTIGPEPWNVAYVEPSRRPA
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCC
DGRYGENPNRLYQHHQFQVIMKPSPLNIQELYLDSLRALGIDPLKHDIRFVEDNWENPTL
CCCCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCC
GCAGLGWEVWLDGMEITQFTYFQQVGGMEANPVSAEITYGLERLATYIQDKENVFDLEWV
EEECCCHHHEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHH
EGFTYGDIFLQPEYEHSTYTFEVSNVDMLFDLFSTYEKEAERALARDLVFPAYDYILKCS
CCCEECEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HSFNLLDARGAISVTERTGYIARVRTLARKAARKYYEEREKLGFPMLKKEDAHDE
CCCCEEECCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA