| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is yrrI [H]
Identifier: 56963356
GI number: 56963356
Start: 1715680
End: 1716756
Strand: Direct
Name: yrrI [H]
Synonym: ABC1591
Alternate gene names: 56963356
Gene position: 1715680-1716756 (Clockwise)
Preceding gene: 56963355
Following gene: 56963357
Centisome position: 39.86
GC content: 46.15
Gene sequence:
>1077_bases ATGAAGCGGGAACGGCTGCAAACAGACGTGTTGAAATGGACGAAATATTTACTGATCGTGCTATTGTTGTTGCTGGTAGG CCAAGTAGTGTTATTTTTACGGCCAGTGTGGGACATTTTGGCGACATTGCTCGGACCGCTTTGTGTTGCTTTTGTATCGG CCTATTTGCTTCACCCCATTGTTGAGTGGTTTGTTCGTCTCGGATTGCCGCGAGCACTTGCCACGTTTATGTTGTTTTTA GCATTTATTCTTGCAATTGCCGCTATGCTTTTTTGGGGATTGCCCGCACTTGCGGCACAGGTAAAAGAAGCCATGGATGT ACTGCCAGGGCAATTGGCTGAAGTGAAAAAGTCACTGTTGAACTTACAACGTACGGCGGAAAACTTACCAAACCCACTTG ACGACCATGTCGGCGAATGGAGTGTGAAAATTGAATCGTTCGCAAAAGCGGGGCTTGACCAGATCGAACAAGTGATTATC CGGATGTTACAGTCCTTCATGACATGGATCGTCGTTCCTTTTTTAGTGTTTTACCTTTTAAAAGACTACGAGCTCCTTAA ACGGGTTGCTTTTTACTTAACGCCAAGAAAATGGCGAAAAGGGTTGACAGCCTATGCAAACGATGTTGATCGGACATTTG GTTCCTATGTTCGTGGTCAGCTGCTAGTCGCTTTTTGTGTTGGCGTGCTTTCGACTGTTGCTCTGTGGATTCTTGGCGTT CCTTATCCAATTGTGCTCGGTTTTTTTGTTGGTGCGACCGATTTTATCCCTTATTTCGGCGCGATTATTGGCGCGATTCC AGCAGTCGGTGCTGCTCTTCTTGAATCAACGACGCTCGGTCTTTATACAGTGATTGCATTAGTCATTATTCAGCAAATTG AAGGGAATCTGCTATCGCCGGTCATTGTCGGCCGGACGGTTCATTTGCATCCAATGATCATCATTATTGCACTGTTAATT GGCGTGGAAGCTGGTGGCATTGTTGGTTTGCTCATTGCCGTCCCAGTTGCGGCGATTTTAAAGGTGACGGTCGTCCATAT TCGTCAGTCCATTAAAGGCGATATCCAGCACGATTGA
Upstream 100 bases:
>100_bases GCCTAGACAAGAAAAAGCGGCCGCAATAGGGCCGCTTTTTTTGATTACGAAGCCACTGTTTTGCGCAAGCTAGGGAGGAG AGGCAAAAGGAGTGGGAGTC
Downstream 100 bases:
>100_bases CATTTGTATCCTTGAACGCTATAATCGTGCTGAAAAAGATATACCGGAAAACGGTTATTGCGTTGATAGAACGAGTACGT GTCAGCCCGTCTAAAGAGAA
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MKRERLQTDVLKWTKYLLIVLLLLLVGQVVLFLRPVWDILATLLGPLCVAFVSAYLLHPIVEWFVRLGLPRALATFMLFL AFILAIAAMLFWGLPALAAQVKEAMDVLPGQLAEVKKSLLNLQRTAENLPNPLDDHVGEWSVKIESFAKAGLDQIEQVII RMLQSFMTWIVVPFLVFYLLKDYELLKRVAFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGV PYPIVLGFFVGATDFIPYFGAIIGAIPAVGAALLESTTLGLYTVIALVIIQQIEGNLLSPVIVGRTVHLHPMIIIIALLI GVEAGGIVGLLIAVPVAAILKVTVVHIRQSIKGDIQHD
Sequences:
>Translated_358_residues MKRERLQTDVLKWTKYLLIVLLLLLVGQVVLFLRPVWDILATLLGPLCVAFVSAYLLHPIVEWFVRLGLPRALATFMLFL AFILAIAAMLFWGLPALAAQVKEAMDVLPGQLAEVKKSLLNLQRTAENLPNPLDDHVGEWSVKIESFAKAGLDQIEQVII RMLQSFMTWIVVPFLVFYLLKDYELLKRVAFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGV PYPIVLGFFVGATDFIPYFGAIIGAIPAVGAALLESTTLGLYTVIALVIIQQIEGNLLSPVIVGRTVHLHPMIIIIALLI GVEAGGIVGLLIAVPVAAILKVTVVHIRQSIKGDIQHD >Mature_358_residues MKRERLQTDVLKWTKYLLIVLLLLLVGQVVLFLRPVWDILATLLGPLCVAFVSAYLLHPIVEWFVRLGLPRALATFMLFL AFILAIAAMLFWGLPALAAQVKEAMDVLPGQLAEVKKSLLNLQRTAENLPNPLDDHVGEWSVKIESFAKAGLDQIEQVII RMLQSFMTWIVVPFLVFYLLKDYELLKRVAFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGV PYPIVLGFFVGATDFIPYFGAIIGAIPAVGAALLESTTLGLYTVIALVIIQQIEGNLLSPVIVGRTVHLHPMIIIIALLI GVEAGGIVGLLIAVPVAAILKVTVVHIRQSIKGDIQHD
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI1788838, Length=323, Percent_Identity=30.3405572755418, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI87082271, Length=310, Percent_Identity=24.8387096774194, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 39554; Mature: 39554
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRERLQTDVLKWTKYLLIVLLLLLVGQVVLFLRPVWDILATLLGPLCVAFVSAYLLHPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEWFVRLGLPRALATFMLFLAFILAIAAMLFWGLPALAAQVKEAMDVLPGQLAEVKKSLL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHH NLQRTAENLPNPLDDHVGEWSVKIESFAKAGLDQIEQVIIRMLQSFMTWIVVPFLVFYLL HHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDYELLKRVAFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PYPIVLGFFVGATDFIPYFGAIIGAIPAVGAALLESTTLGLYTVIALVIIQQIEGNLLSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VIVGRTVHLHPMIIIIALLIGVEAGGIVGLLIAVPVAAILKVTVVHIRQSIKGDIQHD HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRERLQTDVLKWTKYLLIVLLLLLVGQVVLFLRPVWDILATLLGPLCVAFVSAYLLHPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEWFVRLGLPRALATFMLFLAFILAIAAMLFWGLPALAAQVKEAMDVLPGQLAEVKKSLL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHH NLQRTAENLPNPLDDHVGEWSVKIESFAKAGLDQIEQVIIRMLQSFMTWIVVPFLVFYLL HHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDYELLKRVAFYLTPRKWRKGLTAYANDVDRTFGSYVRGQLLVAFCVGVLSTVALWILGV HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PYPIVLGFFVGATDFIPYFGAIIGAIPAVGAALLESTTLGLYTVIALVIIQQIEGNLLSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH VIVGRTVHLHPMIIIIALLIGVEAGGIVGLLIAVPVAAILKVTVVHIRQSIKGDIQHD HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]