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The map label for this gene is yrrB [H]

Identifier: 56963352

GI number: 56963352

Start: 1711714

End: 1712373

Strand: Direct

Name: yrrB [H]

Synonym: ABC1587

Alternate gene names: 56963352

Gene position: 1711714-1712373 (Clockwise)

Preceding gene: 56963351

Following gene: 56963353

Centisome position: 39.77

GC content: 47.58

Gene sequence:

>660_bases
ATGGATAATCAAGCGGGAATTGAGCTCATGCGAAAAGGGAACTATGAAGAAGCGGCAAAACAGTTTGCTGCCTACATTGA
AGAAAATCCAAAAGAACCGACAGGGTATATCAACATGGGGAACTTGCTAGCAGCTCTCAATGACTTTGAGCGTGCGCTCG
TTTTTTATGAGCGAGCACTGGAGCTCGACCACGATGCGACTGTTGCCTATTACGGGATAGGCTGTGTCCATTATCAGCAA
GAAAACCACCAGCAAGCGATTCAAGCGTTTACTGAAGCGCTTACTGGTGGCATGAATGAGGCAGACTTGTTTTACATGCT
AGGCATGAGCTATTACAGCGAAGGGAAGCTTGCTCATGCACAGGCTAACCTAAGCCGAGCATATGAATTAAGTAGTGAAG
ACAGCGAAATTGTTTTTCAATATGGGCTGTGCTTAGCCCAGCTGGAGCTGCTGGACGAAGCCCGTCCTTTGTTTGAAAAA
ACAATTGCCCTTGATCCTAGTCATGCTGATGCTTATTACAATTTAGGGGTTGTCCAGGCAGCGTCTGATGAAGCTGAAGC
AGCACTTGCCTCTTTTAACCAAGCGCTTGCCCACCAACCGGGCCATCTTCTCGCTGGCAACGGCAAACGGCTTATTGAAG
CGACACTTGAAAAAGGGTGA

Upstream 100 bases:

>100_bases
TGAAGGAGATCGTTGCATTGGTGGCGGCGTGATTGACAAAATTCACCGGGAAAATGCGTAAACCGCGTTTTCCTTTTTAG
CTTTCGGAGGGGGAAGGACG

Downstream 100 bases:

>100_bases
AGCTATGGATAATGTTGGGGAAAAAACGCTGGAGAAAGGTTTTGTTAAAGGAAAAGTCGTTCATGTGTTGTTTCGCAATG
AAGAAAACGATTATACAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MDNQAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERALELDHDATVAYYGIGCVHYQQ
ENHQQAIQAFTEALTGGMNEADLFYMLGMSYYSEGKLAHAQANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEK
TIALDPSHADAYYNLGVVQAASDEAEAALASFNQALAHQPGHLLAGNGKRLIEATLEKG

Sequences:

>Translated_219_residues
MDNQAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERALELDHDATVAYYGIGCVHYQQ
ENHQQAIQAFTEALTGGMNEADLFYMLGMSYYSEGKLAHAQANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEK
TIALDPSHADAYYNLGVVQAASDEAEAALASFNQALAHQPGHLLAGNGKRLIEATLEKG
>Mature_219_residues
MDNQAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERALELDHDATVAYYGIGCVHYQQ
ENHQQAIQAFTEALTGGMNEADLFYMLGMSYYSEGKLAHAQANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEK
TIALDPSHADAYYNLGVVQAASDEAEAALASFNQALAHQPGHLLAGNGKRLIEATLEKG

Specific function: Could be an interacting mediator in the complex formation among RNA sulfuration components, RNA processing components, and aminoacyl-tRNA synthetases [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 24184; Mature: 24184

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERAL
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ELDHDATVAYYGIGCVHYQQENHQQAIQAFTEALTGGMNEADLFYMLGMSYYSEGKLAHA
CCCCCCEEEEEECEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH
QANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEKTIALDPSHADAYYNLGVVQA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEE
ASDEAEAALASFNQALAHQPGHLLAGNGKRLIEATLEKG
CCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MDNQAGIELMRKGNYEEAAKQFAAYIEENPKEPTGYINMGNLLAALNDFERALVFYERAL
CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
ELDHDATVAYYGIGCVHYQQENHQQAIQAFTEALTGGMNEADLFYMLGMSYYSEGKLAHA
CCCCCCEEEEEECEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHH
QANLSRAYELSSEDSEIVFQYGLCLAQLELLDEARPLFEKTIALDPSHADAYYNLGVVQA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEE
ASDEAEAALASFNQALAHQPGHLLAGNGKRLIEATLEKG
CCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]