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The map label for this gene is sipV [H]

Identifier: 56963240

GI number: 56963240

Start: 1592873

End: 1593442

Strand: Direct

Name: sipV [H]

Synonym: ABC1475

Alternate gene names: 56963240

Gene position: 1592873-1593442 (Clockwise)

Preceding gene: 56963239

Following gene: 56963242

Centisome position: 37.01

GC content: 46.32

Gene sequence:

>570_bases
ATGGAAGACGGAAAGCGAGGAACAGCAGTGGCAGAAGCGGAAAAGAAATCAGAGTTTTGGGGCTGGGTAAAGGCGATTGC
AATTGCGCTTATTCTTGCGTTTGTAGTCCGGACATTTGTGATGACCAGCTTTGAAGTTCGCGGCGTCTCAATGGTGCCGA
CTGCTCATGACGGTGAGCGTTTTATTGTAAATAAATTAAGCTACCAATTTGGCGAGCCTGAGCGGTTTGATCTCATTGTG
TTCCATGCGACGGAAGAGGATAGCTACATCAAACGGGTGATTGGCTTACCAGGCGATACCATTCGATTTGAGGACGACAT
CCTTTACATTAATGGCGAGCAAATCGAAGAGCCTTACTTGGAAGAAGCAAAAGCTGCTTATTCAGGGCCTGCGTATACGG
AAGATTACTCATTTGAAGAAACCGTCCCAGAGAACCATGTGTTTGTAATGGGTGACAACCGCCCTGCTAGCTTAGACAGC
CGTGTTATTGGCCCAGTTAATGAAGATGAAATCATCGGCAAAGTCGGATTGCGTTTTTGGCCAGTATCTGAATTTGGCTA
TATGGATTGA

Upstream 100 bases:

>100_bases
CCGGTAGGCAAGAAATCCTCCGCATCGCCTCGTGGGGGATTTCTTGTTCTTTTTTTGAATTAATGATACGTTAATAAAAA
GGCGAGCAGGATGCTCATGA

Downstream 100 bases:

>100_bases
AAAACGAGTGCTTTTAGCACTCGTTTTTGCATTTAATCAGAAAAGAGTTGGTGAATAAAATAGGAGTTCCGTTCCATAAT
CATGCGCCAATCTTTAAAAA

Product: signal peptidase I

Products: NA

Alternate protein names: SPase I; Leader peptidase I [H]

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEDGKRGTAVAEAEKKSEFWGWVKAIAIALILAFVVRTFVMTSFEVRGVSMVPTAHDGERFIVNKLSYQFGEPERFDLIV
FHATEEDSYIKRVIGLPGDTIRFEDDILYINGEQIEEPYLEEAKAAYSGPAYTEDYSFEETVPENHVFVMGDNRPASLDS
RVIGPVNEDEIIGKVGLRFWPVSEFGYMD

Sequences:

>Translated_189_residues
MEDGKRGTAVAEAEKKSEFWGWVKAIAIALILAFVVRTFVMTSFEVRGVSMVPTAHDGERFIVNKLSYQFGEPERFDLIV
FHATEEDSYIKRVIGLPGDTIRFEDDILYINGEQIEEPYLEEAKAAYSGPAYTEDYSFEETVPENHVFVMGDNRPASLDS
RVIGPVNEDEIIGKVGLRFWPVSEFGYMD
>Mature_189_residues
MEDGKRGTAVAEAEKKSEFWGWVKAIAIALILAFVVRTFVMTSFEVRGVSMVPTAHDGERFIVNKLSYQFGEPERFDLIV
FHATEEDSYIKRVIGLPGDTIRFEDDILYINGEQIEEPYLEEAKAAYSGPAYTEDYSFEETVPENHVFVMGDNRPASLDS
RVIGPVNEDEIIGKVGLRFWPVSEFGYMD

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019756
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 21419; Mature: 21419

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00760 SPASE_I_2 ; PS00761 SPASE_I_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDGKRGTAVAEAEKKSEFWGWVKAIAIALILAFVVRTFVMTSFEVRGVSMVPTAHDGER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCE
FIVNKLSYQFGEPERFDLIVFHATEEDSYIKRVIGLPGDTIRFEDDILYINGEQIEEPYL
EEEEHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCEEEECCCCCCCHHH
EEAKAAYSGPAYTEDYSFEETVPENHVFVMGDNRPASLDSRVIGPVNEDEIIGKVGLRFW
HHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHCCCEEE
PVSEFGYMD
ECHHCCCCC
>Mature Secondary Structure
MEDGKRGTAVAEAEKKSEFWGWVKAIAIALILAFVVRTFVMTSFEVRGVSMVPTAHDGER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEECCCCCCCCE
FIVNKLSYQFGEPERFDLIVFHATEEDSYIKRVIGLPGDTIRFEDDILYINGEQIEEPYL
EEEEHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCEEEECCCCCCCHHH
EEAKAAYSGPAYTEDYSFEETVPENHVFVMGDNRPASLDSRVIGPVNEDEIIGKVGLRFW
HHHHHHCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEECCCCCHHHHHHCCCEEE
PVSEFGYMD
ECHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8801417 [H]