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The map label for this gene is yfiM [H]

Identifier: 56963200

GI number: 56963200

Start: 1547731

End: 1548996

Strand: Direct

Name: yfiM [H]

Synonym: ABC1435

Alternate gene names: 56963200

Gene position: 1547731-1548996 (Clockwise)

Preceding gene: 56963199

Following gene: 56963201

Centisome position: 35.96

GC content: 42.89

Gene sequence:

>1266_bases
ATGCGAAGTTATATAAAAAAAGACTTGCTTACGTTTTGGCGTGATCGGAAAGAACTGATTACTGTGCTGGTGCTGCCGAT
TCTATTAGTAGTTGTGCTCAATTTTGCTTTTTCTGGGTTGCTTGGAAACGATGAGGAAACGATTGATTTACATGTAGCGA
TCGTCAATCAGGATGATGAAACAGAAGCATCAGCACAATTAAAGGAAAAATTGCTTCATGATGCTTCATTGGCAGAACAA
GAAGCGCAAGACCTAGTTCGACGAACAAGTGAAGTGCGTCCAGTGCAAGTACTTGTCGACTATTTCGAAAGCGACGACTT
AAAAGAGTGGGTGACTGTTTACGAACTAGAGGAGGCGGAGGCAGTCGAAAAGGTTGAAGAGGGGGAGATAGATGGCTTTG
TTCTCATACCCGATGGCTTTACTGTAGACAGTTTATATGCCGCGGTAACAGGAGAATCTCCGGCTACGACGTTGACGTTT
AAGAGGGAAAAAGAAACGAGTGATACTAGTGCATTATACAATATCATACACGGCTTTATGGATCATTTAAATTACCACTT
TGCTTTGGAAACCCTCTCCGGCGCTACTGAAGTAGAGGTGAAGCTTCCTGAAGGAGGCTTTGAACAGGAGGAAGCAGGGC
AGAACTTTTCATTAACGCAATATTTCACGATTACGATGGCCATATTGTTTGCTTTATTTACTGCGGAAACGGTCGCTACA
AAAACAGGGCTGGAAATGAGGCAACAAGTATTTAATCGTATCCTTATCGCGCATCAAAATCGATTGCTGTTTCTAGTTGG
AAAAACAGTCTCAACTTTTTGCTTGGCTTGGCTGCAAATCATGCTTGTCTTTACGTTGGCCCATTTCATTCTTGGCGTAT
TCCCTGAGCGAACGGCGAATTTTTGGTTAGGACTCTTAGGAATCGTTACCTCGGTCTCTTTCGCAATTGCCGGCTTAGCT
GCTATATTTACCACCATTTTGCTGAGAATGAAGAAGGTGGAGGCTGCCAATGGCCTATTTATGCTTGTCATTATACTGTT
TGGTGTCGTAGGAGGCAATTTTGTTCCAATTTACATTTTGCCTGATTGGTTGCAACAAATTGGTGAATGGACACCAAATG
GTCTTGCATTAGTCATGTTTACAGACTGGATCCGGTTCGAACAAGGAACGTCGCTAGTTGGCCCAAGTGTCTTGTTGATC
ATATTCTTTGTATTATGTAGTATCGCTGGTTTAGCCTTTTATCCAAAAAGGGGGGAAGCGCAGTGA

Upstream 100 bases:

>100_bases
ATCGTATTCAAATCATTAATTTTCATACGGAAACGCCAAGTTTGGAGGATGTGTTTCTTCACTTAACTGGACGTAGGCTA
CGGGATTAAGGGAGGCCACT

Downstream 100 bases:

>100_bases
AACCAGTACTATGGGCGCAATTTATGAAAGATAAGCGAAACCCACTTTTGCTATTATTATTAATGGCTGGCAGCATCCTT
GCTACGCTCTTATTTACTGG

Product: multidrug ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRSYIKKDLLTFWRDRKELITVLVLPILLVVVLNFAFSGLLGNDEETIDLHVAIVNQDDETEASAQLKEKLLHDASLAEQ
EAQDLVRRTSEVRPVQVLVDYFESDDLKEWVTVYELEEAEAVEKVEEGEIDGFVLIPDGFTVDSLYAAVTGESPATTLTF
KREKETSDTSALYNIIHGFMDHLNYHFALETLSGATEVEVKLPEGGFEQEEAGQNFSLTQYFTITMAILFALFTAETVAT
KTGLEMRQQVFNRILIAHQNRLLFLVGKTVSTFCLAWLQIMLVFTLAHFILGVFPERTANFWLGLLGIVTSVSFAIAGLA
AIFTTILLRMKKVEAANGLFMLVIILFGVVGGNFVPIYILPDWLQQIGEWTPNGLALVMFTDWIRFEQGTSLVGPSVLLI
IFFVLCSIAGLAFYPKRGEAQ

Sequences:

>Translated_421_residues
MRSYIKKDLLTFWRDRKELITVLVLPILLVVVLNFAFSGLLGNDEETIDLHVAIVNQDDETEASAQLKEKLLHDASLAEQ
EAQDLVRRTSEVRPVQVLVDYFESDDLKEWVTVYELEEAEAVEKVEEGEIDGFVLIPDGFTVDSLYAAVTGESPATTLTF
KREKETSDTSALYNIIHGFMDHLNYHFALETLSGATEVEVKLPEGGFEQEEAGQNFSLTQYFTITMAILFALFTAETVAT
KTGLEMRQQVFNRILIAHQNRLLFLVGKTVSTFCLAWLQIMLVFTLAHFILGVFPERTANFWLGLLGIVTSVSFAIAGLA
AIFTTILLRMKKVEAANGLFMLVIILFGVVGGNFVPIYILPDWLQQIGEWTPNGLALVMFTDWIRFEQGTSLVGPSVLLI
IFFVLCSIAGLAFYPKRGEAQ
>Mature_421_residues
MRSYIKKDLLTFWRDRKELITVLVLPILLVVVLNFAFSGLLGNDEETIDLHVAIVNQDDETEASAQLKEKLLHDASLAEQ
EAQDLVRRTSEVRPVQVLVDYFESDDLKEWVTVYELEEAEAVEKVEEGEIDGFVLIPDGFTVDSLYAAVTGESPATTLTF
KREKETSDTSALYNIIHGFMDHLNYHFALETLSGATEVEVKLPEGGFEQEEAGQNFSLTQYFTITMAILFALFTAETVAT
KTGLEMRQQVFNRILIAHQNRLLFLVGKTVSTFCLAWLQIMLVFTLAHFILGVFPERTANFWLGLLGIVTSVSFAIAGLA
AIFTTILLRMKKVEAANGLFMLVIILFGVVGGNFVPIYILPDWLQQIGEWTPNGLALVMFTDWIRFEQGTSLVGPSVLLI
IFFVLCSIAGLAFYPKRGEAQ

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 47144; Mature: 47144

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSYIKKDLLTFWRDRKELITVLVLPILLVVVLNFAFSGLLGNDEETIDLHVAIVNQDDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
TEASAQLKEKLLHDASLAEQEAQDLVRRTSEVRPVQVLVDYFESDDLKEWVTVYELEEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVEKVEEGEIDGFVLIPDGFTVDSLYAAVTGESPATTLTFKREKETSDTSALYNIIHGFM
HHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
DHLNYHFALETLSGATEVEVKLPEGGFEQEEAGQNFSLTQYFTITMAILFALFTAETVAT
HHCCHHHEEHHHCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KTGLEMRQQVFNRILIAHQNRLLFLVGKTVSTFCLAWLQIMLVFTLAHFILGVFPERTAN
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FWLGLLGIVTSVSFAIAGLAAIFTTILLRMKKVEAANGLFMLVIILFGVVGGNFVPIYIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEC
PDWLQQIGEWTPNGLALVMFTDWIRFEQGTSLVGPSVLLIIFFVLCSIAGLAFYPKRGEA
HHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCC
Q
C
>Mature Secondary Structure
MRSYIKKDLLTFWRDRKELITVLVLPILLVVVLNFAFSGLLGNDEETIDLHVAIVNQDDE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCC
TEASAQLKEKLLHDASLAEQEAQDLVRRTSEVRPVQVLVDYFESDDLKEWVTVYELEEAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
AVEKVEEGEIDGFVLIPDGFTVDSLYAAVTGESPATTLTFKREKETSDTSALYNIIHGFM
HHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
DHLNYHFALETLSGATEVEVKLPEGGFEQEEAGQNFSLTQYFTITMAILFALFTAETVAT
HHCCHHHEEHHHCCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KTGLEMRQQVFNRILIAHQNRLLFLVGKTVSTFCLAWLQIMLVFTLAHFILGVFPERTAN
HHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FWLGLLGIVTSVSFAIAGLAAIFTTILLRMKKVEAANGLFMLVIILFGVVGGNFVPIYIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEC
PDWLQQIGEWTPNGLALVMFTDWIRFEQGTSLVGPSVLLIIFFVLCSIAGLAFYPKRGEA
HHHHHHHHCCCCCCEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]