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The map label for this gene is ybcL [H]

Identifier: 56963154

GI number: 56963154

Start: 1493245

End: 1494465

Strand: Direct

Name: ybcL [H]

Synonym: ABC1382

Alternate gene names: 56963154

Gene position: 1493245-1494465 (Clockwise)

Preceding gene: 56963153

Following gene: 56963157

Centisome position: 34.7

GC content: 48.4

Gene sequence:

>1221_bases
GTGAATGCATTGTCTAACACGTGGAAAGTCTATTTATTGGCTTTAGTTACTTTTTTAGTAGGTACATCAGAGTACGTTAT
TTCTGGCATCTTAGATAAAATCTCGAATACAATGGGTATTTCCGTTACTTCTGCGGGGCAGTTAGTCACGATTTTTTCCT
TTGTATACGCCATTGGTACCCCGATCCTGATGGCGTTGACTGCTAAGGTGGAAAGACAAAAACTGCTGGTTTGGGCGCTA
GGTATCTTCGTAATTGGGAATGTACTGTCATTCGTTTTGCCTGGCTATGCATCGTTTCTCGCAGCTCGCGTCATCATGGC
TCTAGGCGCGGGAATGGTCGTGGTAACTGCTTTGGACATCGCCGCGAAGATTGCTGCTCCAGGCAAACAAGCAAGCGCGA
TTGCTACCGTGGTCATGGGCTTTACGGCTTCCTTGATTATCGGCGTGCCTCTAGGACGTATCGTTGCAGCACAGTTTGGA
TGGAAAGCTGTTTTTGGTATATTGGCACTGGCCGGTCTGGTGGCTATGTTCGTTCTGTACGTCATCATCCCTCGAATTCA
AGGGGATAAACCGATTCCATTGTCCAAACAACTTGCCCTTTTGAAAAAAGGAAACGTAGCGCTAGGGCTTGCGATTACCT
TTTTCTGGCTCGGCGGATACTCGATTGCCTACACCTACATTTCACCGTATCTACTTGATGTTGCCGGATTGAAAGAAGGG
ATGCTGAGTGGAGTGCTGTTGGCGTTCGGCATCGCTAGCCTGCTCGGATCCAAATTCGGCGGTTTCAGCACGGATAAATG
GGGGGTATTCCCGACACTGTCAGGGGGGATGCTCTTGCACGTCATAGCGCTGCTTCTCCTCTCTTTAACGGTTACCTATA
CGCATGCATGGCTGCCGATTGTCATCCTCTTGATTTTGTGGTCGTTTGCGGCATGGTCTTCCGGTCCAACGCAACAAGTC
AATCTAGTTCGGATTGAACCGAATTATTCTGGAATCATGCTAAGTCTGAACCAATCCATGATGCAGTTGTCCATGGCTGC
GGGTGCTGCAATCGGAGGCGTCATGGTTGACCGAGTGTCTCTATCATCCATTACATGGGTCGGAGTGGTTGGAGTCGCTA
TTGCGATCGTAATAGTGACGTTCTTGAGGGCGCGAATGAGTGCCGGTAGTCAAGGTATCGGAGAGAGTATCTGGATGAAG
TTTAAAAAGGCATGCAATTAA

Upstream 100 bases:

>100_bases
AACGTATTCAGTTTTTCGACCTTACACATCGACATATCGCGATATGTAAATTAAAAGGATCCTCATATCGGTAACTGTAA
AAACAATAAAAAAAGGAGAA

Downstream 100 bases:

>100_bases
TGAATTGAAGTTGCACTTGATGGCAAACGACTAAAATGCATCATCTTCTAGTTTCGGAAGATGATGCATGACAACTAAAC
GACATGAGGAGACCCGAATC

Product: major facilitator (MFS) superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNALSNTWKVYLLALVTFLVGTSEYVISGILDKISNTMGISVTSAGQLVTIFSFVYAIGTPILMALTAKVERQKLLVWAL
GIFVIGNVLSFVLPGYASFLAARVIMALGAGMVVVTALDIAAKIAAPGKQASAIATVVMGFTASLIIGVPLGRIVAAQFG
WKAVFGILALAGLVAMFVLYVIIPRIQGDKPIPLSKQLALLKKGNVALGLAITFFWLGGYSIAYTYISPYLLDVAGLKEG
MLSGVLLAFGIASLLGSKFGGFSTDKWGVFPTLSGGMLLHVIALLLLSLTVTYTHAWLPIVILLILWSFAAWSSGPTQQV
NLVRIEPNYSGIMLSLNQSMMQLSMAAGAAIGGVMVDRVSLSSITWVGVVGVAIAIVIVTFLRARMSAGSQGIGESIWMK
FKKACN

Sequences:

>Translated_406_residues
MNALSNTWKVYLLALVTFLVGTSEYVISGILDKISNTMGISVTSAGQLVTIFSFVYAIGTPILMALTAKVERQKLLVWAL
GIFVIGNVLSFVLPGYASFLAARVIMALGAGMVVVTALDIAAKIAAPGKQASAIATVVMGFTASLIIGVPLGRIVAAQFG
WKAVFGILALAGLVAMFVLYVIIPRIQGDKPIPLSKQLALLKKGNVALGLAITFFWLGGYSIAYTYISPYLLDVAGLKEG
MLSGVLLAFGIASLLGSKFGGFSTDKWGVFPTLSGGMLLHVIALLLLSLTVTYTHAWLPIVILLILWSFAAWSSGPTQQV
NLVRIEPNYSGIMLSLNQSMMQLSMAAGAAIGGVMVDRVSLSSITWVGVVGVAIAIVIVTFLRARMSAGSQGIGESIWMK
FKKACN
>Mature_406_residues
MNALSNTWKVYLLALVTFLVGTSEYVISGILDKISNTMGISVTSAGQLVTIFSFVYAIGTPILMALTAKVERQKLLVWAL
GIFVIGNVLSFVLPGYASFLAARVIMALGAGMVVVTALDIAAKIAAPGKQASAIATVVMGFTASLIIGVPLGRIVAAQFG
WKAVFGILALAGLVAMFVLYVIIPRIQGDKPIPLSKQLALLKKGNVALGLAITFFWLGGYSIAYTYISPYLLDVAGLKEG
MLSGVLLAFGIASLLGSKFGGFSTDKWGVFPTLSGGMLLHVIALLLLSLTVTYTHAWLPIVILLILWSFAAWSSGPTQQV
NLVRIEPNYSGIMLSLNQSMMQLSMAAGAAIGGVMVDRVSLSSITWVGVVGVAIAIVIVTFLRARMSAGSQGIGESIWMK
FKKACN

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=332, Percent_Identity=28.0120481927711, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1786595, Length=275, Percent_Identity=25.4545454545455, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1787808, Length=377, Percent_Identity=25.9946949602122, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI145693198, Length=350, Percent_Identity=25.1428571428571, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42849; Mature: 42849

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSNTWKVYLLALVTFLVGTSEYVISGILDKISNTMGISVTSAGQLVTIFSFVYAIGT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
PILMALTAKVERQKLLVWALGIFVIGNVLSFVLPGYASFLAARVIMALGAGMVVVTALDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
AAKIAAPGKQASAIATVVMGFTASLIIGVPLGRIVAAQFGWKAVFGILALAGLVAMFVLY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIIPRIQGDKPIPLSKQLALLKKGNVALGLAITFFWLGGYSIAYTYISPYLLDVAGLKEG
HHHHCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MLSGVLLAFGIASLLGSKFGGFSTDKWGVFPTLSGGMLLHVIALLLLSLTVTYTHAWLPI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VILLILWSFAAWSSGPTQQVNLVRIEPNYSGIMLSLNQSMMQLSMAAGAAIGGVMVDRVS
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LSSITWVGVVGVAIAIVIVTFLRARMSAGSQGIGESIWMKFKKACN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNALSNTWKVYLLALVTFLVGTSEYVISGILDKISNTMGISVTSAGQLVTIFSFVYAIGT
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH
PILMALTAKVERQKLLVWALGIFVIGNVLSFVLPGYASFLAARVIMALGAGMVVVTALDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
AAKIAAPGKQASAIATVVMGFTASLIIGVPLGRIVAAQFGWKAVFGILALAGLVAMFVLY
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIIPRIQGDKPIPLSKQLALLKKGNVALGLAITFFWLGGYSIAYTYISPYLLDVAGLKEG
HHHHCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
MLSGVLLAFGIASLLGSKFGGFSTDKWGVFPTLSGGMLLHVIALLLLSLTVTYTHAWLPI
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VILLILWSFAAWSSGPTQQVNLVRIEPNYSGIMLSLNQSMMQLSMAAGAAIGGVMVDRVS
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
LSSITWVGVVGVAIAIVIVTFLRARMSAGSQGIGESIWMKFKKACN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]