Click here to switch to the map view.

The map label for this gene is 56963108

Identifier: 56963108

GI number: 56963108

Start: 1460928

End: 1461266

Strand: Direct

Name: 56963108

Synonym: ABC1336

Alternate gene names: NA

Gene position: 1460928-1461266 (Clockwise)

Preceding gene: 56963107

Following gene: 56963109

Centisome position: 33.94

GC content: 37.46

Gene sequence:

>339_bases
ATGATTAACGCGGGACATTTTAATAAGCGAATAGAAATTGAAGCTTTTAAAGGTGACTTCGACGACAATGGCATGTGGGT
AGAAGATTGGTTTCCATTTACAAAGGCAATGGCGTTTATTCAGGTGAAGCAGCTAAAGGAAGTTAGTGAAAATGATGTCC
AAACGCGAGAAGGCTATACCGAAATGACCATCAGGCAAAATAAAAAGACAATGGCGATTGAAACCGGTATGCGAGTTAAA
CAAAAGGTATTTGGACAAGAATTGCTTTACAAGGTTGATGACATTGATTATCGACCAAATGACAACAAATACATGACTTT
AAAGTGTATAAAGGAGTGA

Upstream 100 bases:

>100_bases
GACACTTACACGCTTGACAAGCATAAAGACTTGTCTTTTAGCCTTGCCAACATGCTCACATTAATCAAATACGGGAGTGA
TGAAATTGAAGACTCCCAGG

Downstream 100 bases:

>100_bases
TCTCATGGAGTTTGAAGTTTTGAATTGGGATGCTCTTTTGAAACAAGTAGAAGAATTAGGGCGCAACGTTAATCGCGCTG
AAAATGCAGCTATTAAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MINAGHFNKRIEIEAFKGDFDDNGMWVEDWFPFTKAMAFIQVKQLKEVSENDVQTREGYTEMTIRQNKKTMAIETGMRVK
QKVFGQELLYKVDDIDYRPNDNKYMTLKCIKE

Sequences:

>Translated_112_residues
MINAGHFNKRIEIEAFKGDFDDNGMWVEDWFPFTKAMAFIQVKQLKEVSENDVQTREGYTEMTIRQNKKTMAIETGMRVK
QKVFGQELLYKVDDIDYRPNDNKYMTLKCIKE
>Mature_112_residues
MINAGHFNKRIEIEAFKGDFDDNGMWVEDWFPFTKAMAFIQVKQLKEVSENDVQTREGYTEMTIRQNKKTMAIETGMRVK
QKVFGQELLYKVDDIDYRPNDNKYMTLKCIKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13312; Mature: 13312

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINAGHFNKRIEIEAFKGDFDDNGMWVEDWFPFTKAMAFIQVKQLKEVSENDVQTREGYT
CCCCCCCCCEEEEEEECCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
EMTIRQNKKTMAIETGMRVKQKVFGQELLYKVDDIDYRPNDNKYMTLKCIKE
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MINAGHFNKRIEIEAFKGDFDDNGMWVEDWFPFTKAMAFIQVKQLKEVSENDVQTREGYT
CCCCCCCCCEEEEEEECCCCCCCCEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
EMTIRQNKKTMAIETGMRVKQKVFGQELLYKVDDIDYRPNDNKYMTLKCIKE
EEEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA