| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is 56963106
Identifier: 56963106
GI number: 56963106
Start: 1460164
End: 1460646
Strand: Direct
Name: 56963106
Synonym: ABC1334
Alternate gene names: NA
Gene position: 1460164-1460646 (Clockwise)
Preceding gene: 56963105
Following gene: 56963107
Centisome position: 33.93
GC content: 47.0
Gene sequence:
>483_bases ATGGTTACTTATAATGTTTATCGCGACGGTGAAAAGGTAGCGTCTGATCTTAAGGAAAAGACATACACCGATACAGGGCT TGAACCTGATACAAAATACGAATACCAAGTAAGTGCTGAAAATGAAGCTGGTGAGTCTGAGTTATCTGAACCGATTGAAG TTACAACGGAACCTATTCCAGTAACAAGCGTTACCCTGTCGCAAAAGACAATGACGCTTGAAGAAGGGGCAACCAAGACA CTGACAGCAACAGTTGAGCCGTCCAATGCAACTGATAAGACGGTGCGCTATACAACGTCAGATCGAGAGATTGCAACCGT TAGCACTTCGGGCGAGGTGCGAACCATTACAGGAGTTAAAGCTGGCACAGCAACTATAACTGCACGGGCAGGCGAACAAA GTGATGTTTGCACCGTCACTGTAAAAGCACCGCCTGAGCCTGACCCAGAACCGGAACCAGAGGAACCGGAAGAAGATGCT TAA
Upstream 100 bases:
>100_bases CGAGGAAGTTACACCCTAACCCTCCCCAAAAATTGACTTCCAGCGTTGATAGCACCTCTGTCACGCTGGAATGGTCATAG GGGAAGAAAGGAGAATATTT
Downstream 100 bases:
>100_bases GGAAGTCAAGCAATATTTGCGCATAGAAGAAGATTGGACTGAGGAAGATCAGCTAATTGAAAGTATGATCGAAGCGGGCA AAATCTTTATTAAGCAATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVTYNVYRDGEKVASDLKEKTYTDTGLEPDTKYEYQVSAENEAGESELSEPIEVTTEPIPVTSVTLSQKTMTLEEGATKT LTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGVKAGTATITARAGEQSDVCTVTVKAPPEPDPEPEPEEPEEDA
Sequences:
>Translated_160_residues MVTYNVYRDGEKVASDLKEKTYTDTGLEPDTKYEYQVSAENEAGESELSEPIEVTTEPIPVTSVTLSQKTMTLEEGATKT LTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGVKAGTATITARAGEQSDVCTVTVKAPPEPDPEPEPEEPEEDA >Mature_160_residues MVTYNVYRDGEKVASDLKEKTYTDTGLEPDTKYEYQVSAENEAGESELSEPIEVTTEPIPVTSVTLSQKTMTLEEGATKT LTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGVKAGTATITARAGEQSDVCTVTVKAPPEPDPEPEPEEPEEDA
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17225; Mature: 17225
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTYNVYRDGEKVASDLKEKTYTDTGLEPDTKYEYQVSAENEAGESELSEPIEVTTEPIP CEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEECCCCCC VTSVTLSQKTMTLEEGATKTLTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGVK EEEEEECCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCC AGTATITARAGEQSDVCTVTVKAPPEPDPEPEPEEPEEDA CCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTYNVYRDGEKVASDLKEKTYTDTGLEPDTKYEYQVSAENEAGESELSEPIEVTTEPIP CEEEEEEECHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEECCCCCC VTSVTLSQKTMTLEEGATKTLTATVEPSNATDKTVRYTTSDREIATVSTSGEVRTITGVK EEEEEECCCEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEECCC AGTATITARAGEQSDVCTVTVKAPPEPDPEPEPEEPEEDA CCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA