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The map label for this gene is ygaF [H]

Identifier: 56963091

GI number: 56963091

Start: 1437334

End: 1437804

Strand: Direct

Name: ygaF [H]

Synonym: ABC1319

Alternate gene names: 56963091

Gene position: 1437334-1437804 (Clockwise)

Preceding gene: 56963088

Following gene: 56963092

Centisome position: 33.4

GC content: 44.59

Gene sequence:

>471_bases
ATGGTACGACAAGGAGAAAAAGCACCTGATTTTGAACTGCCGGCAAATGGCGGAAAGACGATTCGTTTGTCTGATTACAA
AGGCTCTTACATTGTCCTTTATTTTTACCCGAAAGATATGACCCCTGGCTGCACGACGGAAGCGTGTGATTTTCGCGACC
AAACTGAAGCCTTTAAAAAAGAGGGAGCGATCGTACTAGGTGTAAGCCCCGATCCGGCAGACAAACATGACAAATTTGCC
GAAAAACATGGTCTGCCTTTTCCGCTTGTGGCAGATGAGGACTTGGAGGCTGCAAAAGCGTACGGAGTTTGGCAGCTTAA
AAAGAACTTTGGCAAGGAGTACATGGGCATTGTTCGCTCTACGTTTGTAATTGGCAAAGACTTTACGGTTCTCAAAGAAT
GGCGCAATGTAAAAGTGAAAAACCATGTTGATGATGTACTCGCTTTTGTTAAGGGACAAAATGATGAGTGA

Upstream 100 bases:

>100_bases
AAAGGGCATATGCCAACAGAAAAATCTCTTCATTGAAGAATTTCGCCAATTCCGCTAATCTTTTAAGAGAGAGTAACTGA
TCGAAAAGGAGCGTAATAGA

Downstream 100 bases:

>100_bases
GAACGCATCGGTTGTTTTCTTTATGAAACAAACAGAGGAAAGGCAAGAGCTACTTAAACACTCTTTTGCGAATACGTCCT
TTTATTTTCCTGATAAAAAA

Product: bacterioferritin comigratory protein BCP

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MVRQGEKAPDFELPANGGKTIRLSDYKGSYIVLYFYPKDMTPGCTTEACDFRDQTEAFKKEGAIVLGVSPDPADKHDKFA
EKHGLPFPLVADEDLEAAKAYGVWQLKKNFGKEYMGIVRSTFVIGKDFTVLKEWRNVKVKNHVDDVLAFVKGQNDE

Sequences:

>Translated_156_residues
MVRQGEKAPDFELPANGGKTIRLSDYKGSYIVLYFYPKDMTPGCTTEACDFRDQTEAFKKEGAIVLGVSPDPADKHDKFA
EKHGLPFPLVADEDLEAAKAYGVWQLKKNFGKEYMGIVRSTFVIGKDFTVLKEWRNVKVKNHVDDVLAFVKGQNDE
>Mature_156_residues
MVRQGEKAPDFELPANGGKTIRLSDYKGSYIVLYFYPKDMTPGCTTEACDFRDQTEAFKKEGAIVLGVSPDPADKHDKFA
EKHGLPFPLVADEDLEAAKAYGVWQLKKNFGKEYMGIVRSTFVIGKDFTVLKEWRNVKVKNHVDDVLAFVKGQNDE

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=161, Percent_Identity=37.888198757764, Blast_Score=77, Evalue=6e-15,
Organism=Homo sapiens, GI4505591, Length=161, Percent_Identity=35.4037267080745, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI32455266, Length=161, Percent_Identity=35.4037267080745, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI32455264, Length=161, Percent_Identity=35.4037267080745, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI33188454, Length=83, Percent_Identity=45.7831325301205, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=42.6666666666667, Blast_Score=131, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI193204376, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI32565831, Length=159, Percent_Identity=33.9622641509434, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322180, Length=121, Percent_Identity=33.8842975206612, Blast_Score=64, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17738015, Length=163, Percent_Identity=31.9018404907975, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17157991, Length=106, Percent_Identity=37.7358490566038, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641739, Length=106, Percent_Identity=37.7358490566038, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17568; Mature: 17568

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRQGEKAPDFELPANGGKTIRLSDYKGSYIVLYFYPKDMTPGCTTEACDFRDQTEAFKK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
EGAIVLGVSPDPADKHDKFAEKHGLPFPLVADEDLEAAKAYGVWQLKKNFGKEYMGIVRS
CCCEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHH
TFVIGKDFTVLKEWRNVKVKNHVDDVLAFVKGQNDE
HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVRQGEKAPDFELPANGGKTIRLSDYKGSYIVLYFYPKDMTPGCTTEACDFRDQTEAFKK
CCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
EGAIVLGVSPDPADKHDKFAEKHGLPFPLVADEDLEAAKAYGVWQLKKNFGKEYMGIVRS
CCCEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHH
TFVIGKDFTVLKEWRNVKVKNHVDDVLAFVKGQNDE
HHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]