| Definition | Bacillus clausii KSM-K16, complete genome. |
|---|---|
| Accession | NC_006582 |
| Length | 4,303,871 |
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The map label for this gene is yfkD [H]
Identifier: 56963063
GI number: 56963063
Start: 1412372
End: 1413175
Strand: Direct
Name: yfkD [H]
Synonym: ABC1291
Alternate gene names: 56963063
Gene position: 1412372-1413175 (Clockwise)
Preceding gene: 56963062
Following gene: 56963065
Centisome position: 32.82
GC content: 42.16
Gene sequence:
>804_bases ATGAAACGAATTGCGCTTTTATTGTTGGCTTTTATGTTGGCAATCACGGCTCCTGCGTACGGAAAGTCGGAAGCAAATGA GCCTGAACAAACATCTTTTAAAATTCCTGACTCTGTCTTATCCATTTCTAAAGAAAACACATATAAAAATGCAACACAAG ACTTGCCTTATTTGCAGCCAAGCGAGTTTGCCAAACAATTGCTCCGGTCAACGGAAGAGCAAATTCAAAATCCAGATTTA ATCCGGCTAATGAATGAGTCGTCGATCCAGTTTCCGCAATTGGGATTTGCGATGAGAGCTTCCATTTACTTAGGAGAGTG GCCTCTAGCTTACCAATCAAAAGGAACGGAAGTCAATTGGGAGTATCAAAAAGTCAATACAAATTACATTGACAACCGTG GCGGAAATGCACCAAAGAGCATGTCTTACCTGCAAGAACAACAGAAAAAAGTGACAGGCGGCTTGAGCGCAAAAATACCG AACGGAGAGGCAGTCAAAAAGATGATGATGATTAGCGCCGCTGAGAAAACAAGCTTGCCCCTTGCTTTTGATACAGTGGT TGGCCAAGGGACGAAAAAGAACCAAAAATACAATGTGCCATCACGCCAAGTTGGCTACCTATACGGCTATGTTCCGGCAG TCCAAGAAAAAGGAAATGTCACATATGGGGAAGTGTATTTAACGATAAAAGGCGGAAAACCGAGGTTAGATGTCAAGAAT GTAACCGAGCAAGGCATTAGTGCTTGGATTCCTGTGCAAGACAATATCTCTTTTACGTTTATGGCTTCTACACAACCAAA ATAA
Upstream 100 bases:
>100_bases CAGCAGCGATATGCTGCTGTTTTTTTTATGGCTTTGATGGATAAAACGAAAAGAGATGTCAAACAATACCTTTACAAACG ATAGAAGGAGGGTACTTCTT
Downstream 100 bases:
>100_bases AAAGAACCCATGCCTCTTTCCTAACAAGGGCATGGGTTCTTTTCGCATACTCTTCATTTCCACCAATTAAAAATGAGCAG ATCGTTTTGAAAAATCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKRIALLLLAFMLAITAPAYGKSEANEPEQTSFKIPDSVLSISKENTYKNATQDLPYLQPSEFAKQLLRSTEEQIQNPDL IRLMNESSIQFPQLGFAMRASIYLGEWPLAYQSKGTEVNWEYQKVNTNYIDNRGGNAPKSMSYLQEQQKKVTGGLSAKIP NGEAVKKMMMISAAEKTSLPLAFDTVVGQGTKKNQKYNVPSRQVGYLYGYVPAVQEKGNVTYGEVYLTIKGGKPRLDVKN VTEQGISAWIPVQDNISFTFMASTQPK
Sequences:
>Translated_267_residues MKRIALLLLAFMLAITAPAYGKSEANEPEQTSFKIPDSVLSISKENTYKNATQDLPYLQPSEFAKQLLRSTEEQIQNPDL IRLMNESSIQFPQLGFAMRASIYLGEWPLAYQSKGTEVNWEYQKVNTNYIDNRGGNAPKSMSYLQEQQKKVTGGLSAKIP NGEAVKKMMMISAAEKTSLPLAFDTVVGQGTKKNQKYNVPSRQVGYLYGYVPAVQEKGNVTYGEVYLTIKGGKPRLDVKN VTEQGISAWIPVQDNISFTFMASTQPK >Mature_267_residues MKRIALLLLAFMLAITAPAYGKSEANEPEQTSFKIPDSVLSISKENTYKNATQDLPYLQPSEFAKQLLRSTEEQIQNPDL IRLMNESSIQFPQLGFAMRASIYLGEWPLAYQSKGTEVNWEYQKVNTNYIDNRGGNAPKSMSYLQEQQKKVTGGLSAKIP NGEAVKKMMMISAAEKTSLPLAFDTVVGQGTKKNQKYNVPSRQVGYLYGYVPAVQEKGNVTYGEVYLTIKGGKPRLDVKN VTEQGISAWIPVQDNISFTFMASTQPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29784; Mature: 29784
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIALLLLAFMLAITAPAYGKSEANEPEQTSFKIPDSVLSISKENTYKNATQDLPYLQP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCCHHCCCCCCCH SEFAKQLLRSTEEQIQNPDLIRLMNESSIQFPQLGFAMRASIYLGEWPLAYQSKGTEVNW HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCEEEE EYQKVNTNYIDNRGGNAPKSMSYLQEQQKKVTGGLSAKIPNGEAVKKMMMISAAEKTSLP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC LAFDTVVGQGTKKNQKYNVPSRQVGYLYGYVPAVQEKGNVTYGEVYLTIKGGKPRLDVKN EEEHHHHCCCCCCCCCCCCCCHHHCEEEEECHHHHCCCCEEEEEEEEEEECCCCCCCHHH VTEQGISAWIPVQDNISFTFMASTQPK HHHCCCEEEEEECCCCEEEEEECCCCC >Mature Secondary Structure MKRIALLLLAFMLAITAPAYGKSEANEPEQTSFKIPDSVLSISKENTYKNATQDLPYLQP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCCHHCCCCCCCH SEFAKQLLRSTEEQIQNPDLIRLMNESSIQFPQLGFAMRASIYLGEWPLAYQSKGTEVNW HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCCCCEEEE EYQKVNTNYIDNRGGNAPKSMSYLQEQQKKVTGGLSAKIPNGEAVKKMMMISAAEKTSLP EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC LAFDTVVGQGTKKNQKYNVPSRQVGYLYGYVPAVQEKGNVTYGEVYLTIKGGKPRLDVKN EEEHHHHCCCCCCCCCCCCCCHHHCEEEEECHHHHCCCCEEEEEEEEEEECCCCCCCHHH VTEQGISAWIPVQDNISFTFMASTQPK HHHCCCEEEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]