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The map label for this gene is 56962989

Identifier: 56962989

GI number: 56962989

Start: 1327425

End: 1327832

Strand: Direct

Name: 56962989

Synonym: ABC1217

Alternate gene names: NA

Gene position: 1327425-1327832 (Clockwise)

Preceding gene: 56962987

Following gene: 56962990

Centisome position: 30.84

GC content: 38.73

Gene sequence:

>408_bases
ATGCATTCTTTTGGAAGTAAACTGAAACAGCTCCGTGAAGAACAAGGGTTTTCACAAGAACAATTGGCGAAAGAATTGAA
CGTTTCGAGGCAAGCCGTATGGAAATGGGAGACAGACAAAGGTTTGCCAGACATTCAAAATATTGTCCGCCTAAGTGAAT
TATTCGACGTTTCGACTGATTATTTATTAAAGGAGAGCGAGCTAATAGCGGAACCCACTCCGAGTAGGAAATGGGACAGC
GAACAAGACATTGGTTTTTATTTAGGGATGATTCTAATTTTAATTGGCGCTTTGGCATTTGAAGGGAGCACTTCATGGAT
TTTGATATCGTTTGGGTTAGCCTTTCTCATATTTTTTGATGATCTGCTCATTTCAATAAAGCGTTTCTTTTCTAATCGTG
ACAATTAA

Upstream 100 bases:

>100_bases
GCTGTAAACAGGTTTTTAACTGATCGTGGTCATTAATAAACGGCAAGTAGCGTACACGATGATGTTAGATTTGCTATCAT
AGGGGGTGAGGTGAGCAAAC

Downstream 100 bases:

>100_bases
ATGAGAGTGAGTGCTTCTGAGAGGAATTGCTTCCTTTGATATGGTAAAGTTAAAGCAGCGGACTTTCTTGCCTTGTTGAA
GGAGGAATACATATGGGCAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Xre Family; Transcription Regulator; Prophage; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MHSFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTDYLLKESELIAEPTPSRKWDS
EQDIGFYLGMILILIGALAFEGSTSWILISFGLAFLIFFDDLLISIKRFFSNRDN

Sequences:

>Translated_135_residues
MHSFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTDYLLKESELIAEPTPSRKWDS
EQDIGFYLGMILILIGALAFEGSTSWILISFGLAFLIFFDDLLISIKRFFSNRDN
>Mature_135_residues
MHSFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTDYLLKESELIAEPTPSRKWDS
EQDIGFYLGMILILIGALAFEGSTSWILISFGLAFLIFFDDLLISIKRFFSNRDN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15582; Mature: 15582

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTD
CCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHH
YLLKESELIAEPTPSRKWDSEQDIGFYLGMILILIGALAFEGSTSWILISFGLAFLIFFD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLLISIKRFFSNRDN
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MHSFGSKLKQLREEQGFSQEQLAKELNVSRQAVWKWETDKGLPDIQNIVRLSELFDVSTD
CCHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHH
YLLKESELIAEPTPSRKWDSEQDIGFYLGMILILIGALAFEGSTSWILISFGLAFLIFFD
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
DLLISIKRFFSNRDN
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA