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The map label for this gene is yesO [H]

Identifier: 56962985

GI number: 56962985

Start: 1323147

End: 1324505

Strand: Direct

Name: yesO [H]

Synonym: ABC1213

Alternate gene names: 56962985

Gene position: 1323147-1324505 (Clockwise)

Preceding gene: 56962984

Following gene: 56962986

Centisome position: 30.74

GC content: 48.12

Gene sequence:

>1359_bases
ATGAAAGGTCGGTTAAAGGACGCCTGTCATGTTGTCACGCTTCTAGCCGCCTTTAGTTGTTCCGGCTGCCTGTTTGCTTC
TGTCGGCACCAATGACCCAGTAGAGCTGCGTTTTACCTACTGGGGTGGGCCGCTAGAGCGGGAAGCAGTTGAAACATTAA
TTTCCACATTTAATAACGAGCATCCAGGGATTCAAGTGAGGGCACAGCTTGTCCCGATTAATAGCTATGTGGAGAAAATG
AATGTGATGGCTGCATCGAAAACACTTCCCGACGTTGGCTATTTTCCAGAAGGCAGCTTGTACCCGTGGGTGGAAAACGG
CATGCTTCGGGATTTGACACCGTTGTTGACAGGAAACGAAGCAAACGAAAAGCTCGATTATACGCTATATCAGTTTCATG
ATGGGCCGATTGCTGGGGGCAGCGTTGCGAATGAAGTGATAAACATTTATTACAACAAACAATTGTTTGCAGAAGCGGGA
GTAGAATTGCCGCCAACAAAGGCAGAAGAGGCATGGAGCTGGGATGAATTTGTTGAGGTTGCCAAAAGGCTCACTGTAGA
CCGGAACGGACGGAGGGCGAATGAGCCTGGCTTTGATGAGAACCGGATTGAAACATACGGCGTCAGCAATTTTACGGGGT
GGATCGACTCGTTCTTATTCAGCAACGGCGGCGGTTTTGTTGATGAAACAGGCAAACAGTTGTTGATCGATCAATCTGAA
TCAATAGAAGTGCTGCAGCACGTTGCCGACTTAATGTATGTGCATCATGTTATGCCAAAGCCGTCGGATTTATCAACCGT
TCCAGCGACAGACACGGCGCTTTTAACAAAGCGTGTCGCTATGGCCGTTGATGGCCAATGGGCGATGCAAGAACTTGGCC
GGGCGAGTGTCGAAGACGGTTTGGATTTTGGCATCGGCGTGCTGCCGTATTTTGAACAACCAGCAACGACCAATTACGGC
ACGCCGATTGTGGCCTTTGAGACAGGGAAGGAAGGCGAGCATAGGCAAGCAGTCGATACGTTTTTAACATACATCATGGA
TCCGGAAAATGTGTTAATGCTTATTAATGAAGGGCTGTGGATGCCAAACGAAACAGCCTGGTATGAGGATCGTGAAAAAA
TAGAGCGTTGGATCGACACGCCGATTCATCCACCTGAATACGAAGAGGCAGTGATCGACTGGGCTAAAGACTATGTTGTC
CAAAACCCGAATTATTTTTGGGATGATCGGCAAAAAGCAGGCGACATCATTTCACCTGCCCTAGACCAGCTATGGCTAAA
CAACAAAACAGCAGAGGAAGTCGTCCATGAAGACATTATGCCAAGGATGAAACGCCAGTTTGGCGATAAATATGAGTAG

Upstream 100 bases:

>100_bases
CATTGCAGTTCATCCCTTATTATGCCTGGGCCAACCGCGGCGAAGGCGAGATGGCTGTTTGGCTGCGCCATAGATAGCTT
TTAAAAAGGAGGAAAGGCCA

Downstream 100 bases:

>100_bases
GGAGGGGGCAAATGTGGACATTGAACCGCTGAAACCGTCGATACGGGCAAGGAAAAAGGCGACCCGGTTTGCGAGAAAAG
AGTATCTTGCTGGCTACCTG

Product: sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKGRLKDACHVVTLLAAFSCSGCLFASVGTNDPVELRFTYWGGPLEREAVETLISTFNNEHPGIQVRAQLVPINSYVEKM
NVMAASKTLPDVGYFPEGSLYPWVENGMLRDLTPLLTGNEANEKLDYTLYQFHDGPIAGGSVANEVINIYYNKQLFAEAG
VELPPTKAEEAWSWDEFVEVAKRLTVDRNGRRANEPGFDENRIETYGVSNFTGWIDSFLFSNGGGFVDETGKQLLIDQSE
SIEVLQHVADLMYVHHVMPKPSDLSTVPATDTALLTKRVAMAVDGQWAMQELGRASVEDGLDFGIGVLPYFEQPATTNYG
TPIVAFETGKEGEHRQAVDTFLTYIMDPENVLMLINEGLWMPNETAWYEDREKIERWIDTPIHPPEYEEAVIDWAKDYVV
QNPNYFWDDRQKAGDIISPALDQLWLNNKTAEEVVHEDIMPRMKRQFGDKYE

Sequences:

>Translated_452_residues
MKGRLKDACHVVTLLAAFSCSGCLFASVGTNDPVELRFTYWGGPLEREAVETLISTFNNEHPGIQVRAQLVPINSYVEKM
NVMAASKTLPDVGYFPEGSLYPWVENGMLRDLTPLLTGNEANEKLDYTLYQFHDGPIAGGSVANEVINIYYNKQLFAEAG
VELPPTKAEEAWSWDEFVEVAKRLTVDRNGRRANEPGFDENRIETYGVSNFTGWIDSFLFSNGGGFVDETGKQLLIDQSE
SIEVLQHVADLMYVHHVMPKPSDLSTVPATDTALLTKRVAMAVDGQWAMQELGRASVEDGLDFGIGVLPYFEQPATTNYG
TPIVAFETGKEGEHRQAVDTFLTYIMDPENVLMLINEGLWMPNETAWYEDREKIERWIDTPIHPPEYEEAVIDWAKDYVV
QNPNYFWDDRQKAGDIISPALDQLWLNNKTAEEVVHEDIMPRMKRQFGDKYE
>Mature_452_residues
MKGRLKDACHVVTLLAAFSCSGCLFASVGTNDPVELRFTYWGGPLEREAVETLISTFNNEHPGIQVRAQLVPINSYVEKM
NVMAASKTLPDVGYFPEGSLYPWVENGMLRDLTPLLTGNEANEKLDYTLYQFHDGPIAGGSVANEVINIYYNKQLFAEAG
VELPPTKAEEAWSWDEFVEVAKRLTVDRNGRRANEPGFDENRIETYGVSNFTGWIDSFLFSNGGGFVDETGKQLLIDQSE
SIEVLQHVADLMYVHHVMPKPSDLSTVPATDTALLTKRVAMAVDGQWAMQELGRASVEDGLDFGIGVLPYFEQPATTNYG
TPIVAFETGKEGEHRQAVDTFLTYIMDPENVLMLINEGLWMPNETAWYEDREKIERWIDTPIHPPEYEEAVIDWAKDYVV
QNPNYFWDDRQKAGDIISPALDQLWLNNKTAEEVVHEDIMPRMKRQFGDKYE

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51073; Mature: 51073

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRLKDACHVVTLLAAFSCSGCLFASVGTNDPVELRFTYWGGPLEREAVETLISTFNNE
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
HPGIQVRAQLVPINSYVEKMNVMAASKTLPDVGYFPEGSLYPWVENGMLRDLTPLLTGNE
CCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCC
ANEKLDYTLYQFHDGPIAGGSVANEVINIYYNKQLFAEAGVELPPTKAEEAWSWDEFVEV
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHCCCHHHHHHH
AKRLTVDRNGRRANEPGFDENRIETYGVSNFTGWIDSFLFSNGGGFVDETGKQLLIDQSE
HHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCH
SIEVLQHVADLMYVHHVMPKPSDLSTVPATDTALLTKRVAMAVDGQWAMQELGRASVEDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHCC
LDFGIGVLPYFEQPATTNYGTPIVAFETGKEGEHRQAVDTFLTYIMDPENVLMLINEGLW
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC
MPNETAWYEDREKIERWIDTPIHPPEYEEAVIDWAKDYVVQNPNYFWDDRQKAGDIISPA
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCHHHCCCHHHHH
LDQLWLNNKTAEEVVHEDIMPRMKRQFGDKYE
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKGRLKDACHVVTLLAAFSCSGCLFASVGTNDPVELRFTYWGGPLEREAVETLISTFNNE
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCC
HPGIQVRAQLVPINSYVEKMNVMAASKTLPDVGYFPEGSLYPWVENGMLRDLTPLLTGNE
CCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCCCC
ANEKLDYTLYQFHDGPIAGGSVANEVINIYYNKQLFAEAGVELPPTKAEEAWSWDEFVEV
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHCCCHHHHHHH
AKRLTVDRNGRRANEPGFDENRIETYGVSNFTGWIDSFLFSNGGGFVDETGKQLLIDQSE
HHHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCH
SIEVLQHVADLMYVHHVMPKPSDLSTVPATDTALLTKRVAMAVDGQWAMQELGRASVEDG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCHHHHHCC
LDFGIGVLPYFEQPATTNYGTPIVAFETGKEGEHRQAVDTFLTYIMDPENVLMLINEGLW
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCC
MPNETAWYEDREKIERWIDTPIHPPEYEEAVIDWAKDYVVQNPNYFWDDRQKAGDIISPA
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCHHHCCCHHHHH
LDQLWLNNKTAEEVVHEDIMPRMKRQFGDKYE
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]