Click here to switch to the map view.

The map label for this gene is 56962959

Identifier: 56962959

GI number: 56962959

Start: 1301115

End: 1301498

Strand: Direct

Name: 56962959

Synonym: ABC1187

Alternate gene names: NA

Gene position: 1301115-1301498 (Clockwise)

Preceding gene: 56962958

Following gene: 56962960

Centisome position: 30.23

GC content: 50.52

Gene sequence:

>384_bases
ATGGCCGATCAAACCGAAATAGCCAAGCTCCACTATGAAATTAGCCAAATGCGGGCGCAACTTTTCCAGACAGAAGCGCA
ATTGGAGCGATTGCGGGCGGCCAAACAAGCGCTTGTTTCCGAACAAGCGACTCTTCACGACCATAAAAAATGGGGGAGCG
AACCAGAGCTAGACCATGATGCGTGGCGCGGCCAAGCCGAATCGACGCACGATGACATTCGCCGCCATATGCAACTGGCT
TACACGAACGTACAAGACGAAACGGAACAACTGATGCGCGCGATTGAAATGGAAACGAGGCGGCTCCAAACAATGGTGTC
TTCTTGTCAAGTCGTGATCAACATAAAGCAACAATCGCTCCAAACGTTAAAAGCGACGAAATAG

Upstream 100 bases:

>100_bases
GTTTTTTCTAGACGATTTCGAACAGTTGTTTTAAAATAAAATGGAATGAATAGCCATTTTTTTAGACGAAGAATGAAACC
ACCAGGGGGGAGGATGGCCG

Downstream 100 bases:

>100_bases
GAAAGGAAAGGAGGAGAGAACCGATGGCTGAAATCAAAATCGACGAAGGCTCCGTGCTCAGCGCTTTAAGCGAAACCGGG
GAACAGGCCAGCTATTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MADQTEIAKLHYEISQMRAQLFQTEAQLERLRAAKQALVSEQATLHDHKKWGSEPELDHDAWRGQAESTHDDIRRHMQLA
YTNVQDETEQLMRAIEMETRRLQTMVSSCQVVINIKQQSLQTLKATK

Sequences:

>Translated_127_residues
MADQTEIAKLHYEISQMRAQLFQTEAQLERLRAAKQALVSEQATLHDHKKWGSEPELDHDAWRGQAESTHDDIRRHMQLA
YTNVQDETEQLMRAIEMETRRLQTMVSSCQVVINIKQQSLQTLKATK
>Mature_126_residues
ADQTEIAKLHYEISQMRAQLFQTEAQLERLRAAKQALVSEQATLHDHKKWGSEPELDHDAWRGQAESTHDDIRRHMQLAY
TNVQDETEQLMRAIEMETRRLQTMVSSCQVVINIKQQSLQTLKATK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14802; Mature: 14671

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQTEIAKLHYEISQMRAQLFQTEAQLERLRAAKQALVSEQATLHDHKKWGSEPELDHD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AWRGQAESTHDDIRRHMQLAYTNVQDETEQLMRAIEMETRRLQTMVSSCQVVINIKQQSL
HHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLKATK
HHHHCCC
>Mature Secondary Structure 
ADQTEIAKLHYEISQMRAQLFQTEAQLERLRAAKQALVSEQATLHDHKKWGSEPELDHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
AWRGQAESTHDDIRRHMQLAYTNVQDETEQLMRAIEMETRRLQTMVSSCQVVINIKQQSL
HHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLKATK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA