Click here to switch to the map view.

The map label for this gene is gspE2

Identifier: 56477797

GI number:

Start: 2459132

End: 2461489

Strand: Direct

Name: gspE2

Synonym: ebA4169

Alternate gene names: NA

Gene position: NA

Preceding gene: 56477796

Following gene: 56477798

Centisome position: NA

GC content: NA

Gene sequence:

>2358_bases
ATGTCCATGACAGCAGCGCCCGGACGGGCCAGGAAAGGTAGCGACGTCGCCGGCCGTCTCGCGTTTTTCAAAGGACTGCA
GGCGATCACGGCACGCATCGATGCCGCCGACGACGTCGATCGCGTCGTCCTCGACCTTTCCGCCGACCTGTGCACGCTGT
TCGACGCCGACAGCCTGTGCTTCTTCGCCCTCGATGAGGCCGGCACGACGCTCGTCTTGCGCGTCAGGACCGGCCCGGCG
CCCGTCGAAGCGCGACTCCCGGTCGCAGCGCGCAGCATCGCCGGCTACGTCGCACTGCGCCGGCAGCCCGTCAATATTCG
CGACGTGCATGACCAGACCGCGCTCCGCGCGCTTTCCCCGGAGCTGCGCTTTCCCCGGAACGGCGACGAGCGCAGCGGCT
ACCGCACGCGGCAGGTGCTTGCGGCGCCGCTCATCGATCCCGCGAGCGGCGCGCTGCAAGGCGTGATGCTGCTGATCAAC
GTCACGCGCGGCGAGGAATTTTCGGGCGTCGCGAAGGACGGCCTGCTCGGGCTCGCGCAGGCCCTGGGCGTCGCATACGC
CCGACAGGGCAAAGCGCCGGCGGCGCTGCGCTCGCGCTACGATGCGCTGGTCGTCGACGGGCGCCTCGGCGCGGACGAAC
TCGACGAGGCGGTGCGCCGCGCCCGCGAATGGGGTGCGACGGTCGATGAAGTGCTCGTCGCGACTCGCGGCATCGCGCTG
TCCGAGCTTGGCGATGCGGCGTCGCGCTTCTTCCACGTGCCGTACGAGCCTTACCGCCAGGATCGCGTCAAGCAGCTCGA
CCTGCTGCGCCACATCAAGCGCGAGTACGTGCAGCAGACGGGATGGCTGCCGCTCGAGGAGACTCCCGAAGGCATCGTCG
TGCTAGCGTGGGACCCCGAGCAGGTCCGTGCGTCGCGCATCGCGCACAACGTGTTCCCGAAGCGCCGGCTCGCCTTCCGC
GTGACGACGCGCGACGAATTCGACCGCACCGTCGATCAGTATTTCGAGCCTTCGATGGAGCTCGGTTCGGTGTCCGATCT
GCTGCAGGACCTGCCCGAAGACGAGCAGGACCTGGTCGCCGACGACGTCCTGGCGGCGGCGGACAACGAACTCGTCAAGC
TCGTGAACAAGGTCATCATCGACGCGTATCGGCAGGGTGCGTCGGACATCCATGTCGAGCCGCGCCCGGGCAAGGACAAG
ACGCACATCCGCTTCCGCAAGGACGGCACGCTCGTGCCGTACATCCAGGTGCCGGCGAGCTACCGCAATGCGCTCGTGAC
GCGCCTCAAGATCATGTGCGACCTCGACATCTCGGAGCGGCGCAAGCCGCAGGACGGCAAGATCCGCTTCCGCAAGTTCG
CGCCGCTCGACATCGAGCTGCGCGTCGCGACGGTGCCGACCGCCGGCGGCATGGAGGACGTCGTGATGCGCCTGCTCGGC
CACAGCGAGCCGATCCGGCTCGAGCAGCTCGGCCTGACCGCGCACAACCTCGAGCGCCTCCGGCGCACGATCGCCAAGCC
CTACGGCCTGTTCTTCGTCTGCGGGCCGACCGGCTCGGGCAAGACGACGACGCTGCACTCCATCCTCGGCCACCTCAACA
CGCCGGAAACGAAGATCTGGACTGCCGAAGACCCCGTCGAGATCACGCAGAAAGGGCTGCGCCAGGTTCAGGTCAACCGC
AAGGCCGGCCTCGATTTTGCGACGATGATGCGCGCATTCCTCCGCGCCGATCCGGACGTCATCATGGTCGGCGAAATGCG
CGACCTCGAGACGGTGTCGGTGGGCATCGAGGCGTCGCTGACCGGCCACCTCGTGCTGTCGACGCTGCACACCAACAGCG
CGCCGGAATCGATCGTGCGCCTGCTCGACATGGGCATGGACCCGTTCAATTTCGGCGACGCGCTGCTCGGCGTGCTCGCG
CAGCGGCTGGCGAAGCGGCTGTGCACCCATTGCCGGCAAGCCTACCGCGCCGACGAGGCCGAAGTCGTGCAACTGCTCGA
CGAGTACTGCGAAGACATGCACGCGACGCCTGAATTCCACGCCGATCCGCTGGCCGCCCGCGCCGCGGTGTTCGATCGGC
TGCGCGCGACGCATGCGGATGCCGAAGGGCGCTTCACGCTTTACCGGCCGGTCGGCTGCCCGGAGTGCAACTCCGGCTAC
AAGGGGCGGGTCGGACTGCATGAGCTGATGCTCGCCTCGCCCGAGATCAGGCGGATGATCCAGGAGCGCGCGCGCGTCGC
GCAGCTGCTGGGTGTCGCGCTCGCCGAGGGCTTGCGCACGCTGCGCCAGGACGGCATCGAGAAAGTGCTCGGCGGCATCA
CCGACATGGCGCAGGTGCGGCGCGTCTGCGTGCGTTGA

Upstream 100 bases:

>100_bases
AGCAGGGCATGATCCTCGAGTTCTGAATTTCCTGGCGACGCCGGCTAGAATGGCCAGCCTCTGCACGCCCCCGTTGAAAG
CCCCGACACCAGGAACAGGA

Downstream 100 bases:

>100_bases
ACGGTTAGAATCCGCGGCTCGAACGAACAGGAGAACTTCATGCCCCGCATCGCCCCCAGCCTGCTCTCGGCGGATTTCGC
CCGCCTGGGCGAAGAGGTCC

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>785_residues
MSMTAAPGRARKGSDVAGRLAFFKGLQAITARIDAADDVDRVVLDLSADLCTLFDADSLCFFALDEAGTTLVLRVRTGPA
PVEARLPVAARSIAGYVALRRQPVNIRDVHDQTALRALSPELRFPRNGDERSGYRTRQVLAAPLIDPASGALQGVMLLIN
VTRGEEFSGVAKDGLLGLAQALGVAYARQGKAPAALRSRYDALVVDGRLGADELDEAVRRAREWGATVDEVLVATRGIAL
SELGDAASRFFHVPYEPYRQDRVKQLDLLRHIKREYVQQTGWLPLEETPEGIVVLAWDPEQVRASRIAHNVFPKRRLAFR
VTTRDEFDRTVDQYFEPSMELGSVSDLLQDLPEDEQDLVADDVLAAADNELVKLVNKVIIDAYRQGASDIHVEPRPGKDK
THIRFRKDGTLVPYIQVPASYRNALVTRLKIMCDLDISERRKPQDGKIRFRKFAPLDIELRVATVPTAGGMEDVVMRLLG
HSEPIRLEQLGLTAHNLERLRRTIAKPYGLFFVCGPTGSGKTTTLHSILGHLNTPETKIWTAEDPVEITQKGLRQVQVNR
KAGLDFATMMRAFLRADPDVIMVGEMRDLETVSVGIEASLTGHLVLSTLHTNSAPESIVRLLDMGMDPFNFGDALLGVLA
QRLAKRLCTHCRQAYRADEAEVVQLLDEYCEDMHATPEFHADPLAARAAVFDRLRATHADAEGRFTLYRPVGCPECNSGY
KGRVGLHELMLASPEIRRMIQERARVAQLLGVALAEGLRTLRQDGIEKVLGGITDMAQVRRVCVR

Sequences:
NA

Specific function: NA

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA