Click here to switch to the map view.

The map label for this gene is korA [H]

Identifier: 55981924

GI number: 55981924

Start: 1831050

End: 1832900

Strand: Direct

Name: korA [H]

Synonym: TTHA1955

Alternate gene names: 55981924

Gene position: 1831050-1832900 (Clockwise)

Preceding gene: 55981923

Following gene: 55981925

Centisome position: 98.99

GC content: 70.02

Gene sequence:

>1851_bases
ATGGAGGAGTTCACCTGGCGCGTGGGCGGCCCCCAAGGCGGGGGCATAGAGACGGCGGCCACCCTCTTCGCCCGGGCGGT
GGGCAAGGGGGGGTGGTGGGTGGCCACCAAGCGGGAGTACCACTCCAACATCATGGGGCGGCACTCCTACCTGGACGTGC
GCCTCGCGCGAAAACCGGTCCAGGCCTTCCGGGAGAGGGTGGACTTCCTGGTGGCCCTGGACGGGGAGACCCTGGCCCGG
CACCTGGGGGAGGTGCGGGAAGGGGGGGTGGTGCTCTACGACCCCAAGGTCCTGGAGCTCACCCTGCACAAGCTCCCCAT
GCTGGACCACCGGGTGGCGGAGGACCTGGCCAAGCGCCTGGGCCAGGCCGACCCGTCCCTTAAGGAGGTGCTTCAGGCCT
ACGCCGAGGCCGGGGTCCAGCCCCTGCCCTACCCCTTTGAGGCGGTGGCGGACCGGATCGGGGAGGCCCTGGGGGTGCCC
TCCCTCAAGGCCCGGCGCACCCTGAACACCATCGCCGTGGCGGCGAGCCTCCACCTCCTCAGCTACCCCTTAGAACCCCT
CCTCCAGGCCCTCGCCCTCCAGTTCCGGGGGGAGGTGCTGGAGCTCAACCGCAAGGTGGCCGAGGCCGTGTACCGGGAGG
AGGCGCCCAGGCTTCCCTTCCGCCTCGAGGTCCTGGGCCCCGCGCCCGGCCGGATCTACCTCACCGGGGCCCAGGCCGCC
GCTTTGGGCAAGCTCGCCGGAGGCCTCCGCTTCCAGACCTACTACCCCATAAGCCCCGCCACGGACGAGAGCGTCTTCCT
CGAGGCCCACACCCACCTCCCCGGGGCGGACGTGGCCGTGGTCCAGACGGAGGACGAGATCGCCGCGGTGAACATGGCGG
TGGGGGCCGCCCTCGCCGGGGCCAAGGCGGCCACGGCCACAAGCGGCCCCGGCTTCAGCCTCATGGCCGAGGGGCTGGGC
TTCGCCGGGATGATTGAGGCGCCCTTGGTGGTGACCCTCTACCAGCGGGGCGGGCCCAGCACCGGGCTTCCCACCCGCAC
GGAGCAGGGGGACCTGATGTTCGCCATACGGGGCGGGCACGGGGAGTACCCGAGGCTCGTCTTGGCCTCGGGGGACATCC
TGGACGCCTTTTTGGATGCCCAGAAGGCCCTCGCCTGGGCCTGGCGCTACCAGACGGTGGTGGTCCACCTCCTGGACAAG
TTCCTGGCCTCCCTGGCCCAAAGCCTTCCCAAGGAGGCCCTGAAGGTGCTTTCCCTGGACGGGGAAAAGCGCCTCTCCCC
CCGGGAGGGCTTCGGGCCCTACCAGCGGTACGCCCCGGGAGAGGACGGCCTTTCCCCCTTCATCCCCATCGGCACCCCTG
GGGGCTTCTACTGGATGACCTCCGACGAGCACGACCCCCTGGGCCACATCACCGAAGACGTGGAGCTCAGGGAGCTCCAG
ATGGAAAAGCGCATGGAGAAGCTGGAGCTCGCCCGCAAGGAGATCCCCCTCGAGGACCAGTACACCCTCTTCCGGGATGG
GGAGGTGCTGGTCTTGGGCTGGGGGACGGTGAAGGGCACCCTCCTGGAGGCCCTGGACCACCTGGAAGGGGTGGGCTACC
TCCACCTCCGCCTCCTCTGGCCCTTTCCCCGGATCGCCCCCCTTCTGGAGGGGAAGACCCTGGTGACGGTGGAGCACAAC
TACTCGGGGCAGCTCGCCGACCTCGTGCAGCAGGAAACCCTGAAGCGGGTCCACCACCGGGTGGTGAAGTACAACGGCCG
GCCCATCACCCTGGAGGAGGCCGTGGAGGCCCTGAAGGCGGTAAGGGAGGGCCGGGCCCCGGAAAGGCTCGTGCTGAGGA
AGGGAGTCTGA

Upstream 100 bases:

>100_bases
CCAAAAGCCTCTGGGGGCGGAGGCTTCACGAGGCGGACCGGGAGGAATAGCCCTAGCCAGGCCGCCCCCTTTGGGGTAGG
GTAAGCCCAAAGGGGGGAAG

Downstream 100 bases:

>100_bases
GATGCTGGAGCTCAAGCTTGCGGACTACAAGGCGGAAAAGCAACCCGACTGGTGCCCGGGGTGCGGGGACTACGGCATCC
TCTCCGCCCTCCAGATGGCC

Product: 2-oxoacid--ferredoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MEEFTWRVGGPQGGGIETAATLFARAVGKGGWWVATKREYHSNIMGRHSYLDVRLARKPVQAFRERVDFLVALDGETLAR
HLGEVREGGVVLYDPKVLELTLHKLPMLDHRVAEDLAKRLGQADPSLKEVLQAYAEAGVQPLPYPFEAVADRIGEALGVP
SLKARRTLNTIAVAASLHLLSYPLEPLLQALALQFRGEVLELNRKVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAA
ALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAGAKAATATSGPGFSLMAEGLG
FAGMIEAPLVVTLYQRGGPSTGLPTRTEQGDLMFAIRGGHGEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDK
FLASLAQSLPKEALKVLSLDGEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELRELQ
MEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHLEGVGYLHLRLLWPFPRIAPLLEGKTLVTVEHN
YSGQLADLVQQETLKRVHHRVVKYNGRPITLEEAVEALKAVREGRAPERLVLRKGV

Sequences:

>Translated_616_residues
MEEFTWRVGGPQGGGIETAATLFARAVGKGGWWVATKREYHSNIMGRHSYLDVRLARKPVQAFRERVDFLVALDGETLAR
HLGEVREGGVVLYDPKVLELTLHKLPMLDHRVAEDLAKRLGQADPSLKEVLQAYAEAGVQPLPYPFEAVADRIGEALGVP
SLKARRTLNTIAVAASLHLLSYPLEPLLQALALQFRGEVLELNRKVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAA
ALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAGAKAATATSGPGFSLMAEGLG
FAGMIEAPLVVTLYQRGGPSTGLPTRTEQGDLMFAIRGGHGEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDK
FLASLAQSLPKEALKVLSLDGEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELRELQ
MEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHLEGVGYLHLRLLWPFPRIAPLLEGKTLVTVEHN
YSGQLADLVQQETLKRVHHRVVKYNGRPITLEEAVEALKAVREGRAPERLVLRKGV
>Mature_616_residues
MEEFTWRVGGPQGGGIETAATLFARAVGKGGWWVATKREYHSNIMGRHSYLDVRLARKPVQAFRERVDFLVALDGETLAR
HLGEVREGGVVLYDPKVLELTLHKLPMLDHRVAEDLAKRLGQADPSLKEVLQAYAEAGVQPLPYPFEAVADRIGEALGVP
SLKARRTLNTIAVAASLHLLSYPLEPLLQALALQFRGEVLELNRKVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAA
ALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAGAKAATATSGPGFSLMAEGLG
FAGMIEAPLVVTLYQRGGPSTGLPTRTEQGDLMFAIRGGHGEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDK
FLASLAQSLPKEALKVLSLDGEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELRELQ
MEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHLEGVGYLHLRLLWPFPRIAPLLEGKTLVTVEHN
YSGQLADLVQQETLKRVHHRVVKYNGRPITLEEAVEALKAVREGRAPERLVLRKGV

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005476 [H]

Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 67576; Mature: 67576

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFTWRVGGPQGGGIETAATLFARAVGKGGWWVATKREYHSNIMGRHSYLDVRLARKPV
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHEEHHHHHHHH
QAFRERVDFLVALDGETLARHLGEVREGGVVLYDPKVLELTLHKLPMLDHRVAEDLAKRL
HHHHHHCCEEEEECCHHHHHHHHHHHHCCEEEECCCEEEHHHHHCCCHHHHHHHHHHHHH
GQADPSLKEVLQAYAEAGVQPLPYPFEAVADRIGEALGVPSLKARRTLNTIAVAASLHLL
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SYPLEPLLQALALQFRGEVLELNRKVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAA
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCHHH
ALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAG
HHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHC
AKAATATSGPGFSLMAEGLGFAGMIEAPLVVTLYQRGGPSTGLPTRTEQGDLMFAIRGGH
CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC
GEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDKFLASLAQSLPKEALKVLSLD
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELRELQ
CCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
MEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHLEGVGYLHLRLLW
HHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEC
PFPRIAPLLEGKTLVTVEHNYSGQLADLVQQETLKRVHHRVVKYNGRPITLEEAVEALKA
CCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEHHHHHHHHHH
VREGRAPERLVLRKGV
HHCCCCCHHHHHCCCC
>Mature Secondary Structure
MEEFTWRVGGPQGGGIETAATLFARAVGKGGWWVATKREYHSNIMGRHSYLDVRLARKPV
CCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCHHEEHHHHHHHH
QAFRERVDFLVALDGETLARHLGEVREGGVVLYDPKVLELTLHKLPMLDHRVAEDLAKRL
HHHHHHCCEEEEECCHHHHHHHHHHHHCCEEEECCCEEEHHHHHCCCHHHHHHHHHHHHH
GQADPSLKEVLQAYAEAGVQPLPYPFEAVADRIGEALGVPSLKARRTLNTIAVAASLHLL
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SYPLEPLLQALALQFRGEVLELNRKVAEAVYREEAPRLPFRLEVLGPAPGRIYLTGAQAA
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEECCHHH
ALGKLAGGLRFQTYYPISPATDESVFLEAHTHLPGADVAVVQTEDEIAAVNMAVGAALAG
HHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHC
AKAATATSGPGFSLMAEGLGFAGMIEAPLVVTLYQRGGPSTGLPTRTEQGDLMFAIRGGH
CCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC
GEYPRLVLASGDILDAFLDAQKALAWAWRYQTVVVHLLDKFLASLAQSLPKEALKVLSLD
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GEKRLSPREGFGPYQRYAPGEDGLSPFIPIGTPGGFYWMTSDEHDPLGHITEDVELRELQ
CCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
MEKRMEKLELARKEIPLEDQYTLFRDGEVLVLGWGTVKGTLLEALDHLEGVGYLHLRLLW
HHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEC
PFPRIAPLLEGKTLVTVEHNYSGQLADLVQQETLKRVHHRVVKYNGRPITLEEAVEALKA
CCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEECCCEEEHHHHHHHHHH
VREGRAPERLVLRKGV
HHCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]