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The map label for this gene is natB [H]

Identifier: 55981892

GI number: 55981892

Start: 1804091

End: 1805269

Strand: Reverse

Name: natB [H]

Synonym: TTHA1923

Alternate gene names: 55981892

Gene position: 1805269-1804091 (Counterclockwise)

Preceding gene: 55981893

Following gene: 55981889

Centisome position: 97.6

GC content: 66.5

Gene sequence:

>1179_bases
ATGGAGGCGGTGCTTCGGCTATTCCGCAAGGAGCTAATCCAGGTTTTTCGCGACCGAAAGCTCCTCTTCTCTACCTTGGT
TCTGCCCGTCCTGCTGATGCCGGTCTTCATGTTCGGGCCCAGCCTCTTCCTAAGCCGGCTCCTGCAGGGAGCGGCGGAAA
GGGTCCAGGAGGTGGCGGTGGCGGGGCTTCCCGAAGAGGCCCTAAAAGCCCTCGAGGCCGCCCGGCTCAAGCCCGTGCCG
GTGCCGGACCCCGAAGAGGCGGTGCGGGAAGGCCGTTTCCCGGCAGGGGTGGTGTTCCGGGAAGGAGCCTACCGCGTTTT
CGGCCGCCTGGCCTCGGGTTTGGGGGAAAGCCAGGTGGTCGTGGAGAAGGTCAAGGGGGCCCTCCAGGCCCTCAAGGAGG
CCCAGGTGGCCGAGGCCCTGGTGCGGGCGGGTCTCCCCAAGGAGATCCTCTCCCCCTTCGCCGTGGAGGTGGTGGACGCC
TCCCCCCCGAAGGAGAAGGCCGGAGGGCTTTTGGGCTTCCTCCTCCCCTTTTTTCTGGTGGTCTTCGTCCTCTCCGGAGG
CCAGGTGGTGGCGGTGGACGCCACGGCGGGGGAGAAGGAGAAGGGGACCCTCGAGGCCCTTCTGGCCGCCCCAGTCCCCC
TGGTCCAGGTGGCCCTGGGCAAGACCCTGGCCACGGTGGCCATGGCCCTCCTCTCGGGGGTGGCGGGGCTTTTGGGGCTC
GCCTTGGGCGGGGCCTGGAGCGCCCGCTTTGGCGGAGGCGTCCTCACGGAGAGGGGCGAGACCCTGGCCCTGGGAGGGCA
GGTGAGCCTGGATGGGGGAAGCTTCCTCGCCCTCTTCCTCACCGCCTTCCTCCTCGCCCTCTTCATGGGGGCGGTGATGG
TGGCCCTGGGGCTTTACGCCAGAAGCTTCAAGGAGGCCCAAAGCTACATGGCGCCCCTACAGCTTTTGTTCCTCCTTCCC
TTGCTCTTTTTGCAGTTTAGGGGCTTTCTTGAGATTGAGGCCTGGCATTACCTCCTCCCTCTCTTCAACGTGGCCCTTCT
CATGGATGCTCTCCTCAAGGGAAGCGCTACCCCTTTGGAGGTGGGGCTCACCTGGGCCTCCACCCTGGTCTACGCCCTGC
TCGCCCTGGGTTTGGCCGTCTGGGTCTTCGGGCGCGAGGACGTGGTGTTCCGCAACTAG

Upstream 100 bases:

>100_bases
ACCGCGGGCGGCTGGTCTACGAGGGCTCCAAGGAGGAGGCCCTGGCCCTGGGGGAAGGGAGCCTGGAAAGGGCTTTTGTG
CGCCAGGTAAGGGGGGCTTG

Downstream 100 bases:

>100_bases
GCCCCTTCAGAACTCCTCGTCCCACTCCACGATGGTCTCGCTGGTGAGGGTGGGGGTGGTCTCCCGCCTCGAGGCCTCGG
GCTCCCGCTCCCGCAGGAGT

Product: sodium ABC transporter permease NatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MEAVLRLFRKELIQVFRDRKLLFSTLVLPVLLMPVFMFGPSLFLSRLLQGAAERVQEVAVAGLPEEALKALEAARLKPVP
VPDPEEAVREGRFPAGVVFREGAYRVFGRLASGLGESQVVVEKVKGALQALKEAQVAEALVRAGLPKEILSPFAVEVVDA
SPPKEKAGGLLGFLLPFFLVVFVLSGGQVVAVDATAGEKEKGTLEALLAAPVPLVQVALGKTLATVAMALLSGVAGLLGL
ALGGAWSARFGGGVLTERGETLALGGQVSLDGGSFLALFLTAFLLALFMGAVMVALGLYARSFKEAQSYMAPLQLLFLLP
LLFLQFRGFLEIEAWHYLLPLFNVALLMDALLKGSATPLEVGLTWASTLVYALLALGLAVWVFGREDVVFRN

Sequences:

>Translated_392_residues
MEAVLRLFRKELIQVFRDRKLLFSTLVLPVLLMPVFMFGPSLFLSRLLQGAAERVQEVAVAGLPEEALKALEAARLKPVP
VPDPEEAVREGRFPAGVVFREGAYRVFGRLASGLGESQVVVEKVKGALQALKEAQVAEALVRAGLPKEILSPFAVEVVDA
SPPKEKAGGLLGFLLPFFLVVFVLSGGQVVAVDATAGEKEKGTLEALLAAPVPLVQVALGKTLATVAMALLSGVAGLLGL
ALGGAWSARFGGGVLTERGETLALGGQVSLDGGSFLALFLTAFLLALFMGAVMVALGLYARSFKEAQSYMAPLQLLFLLP
LLFLQFRGFLEIEAWHYLLPLFNVALLMDALLKGSATPLEVGLTWASTLVYALLALGLAVWVFGREDVVFRN
>Mature_392_residues
MEAVLRLFRKELIQVFRDRKLLFSTLVLPVLLMPVFMFGPSLFLSRLLQGAAERVQEVAVAGLPEEALKALEAARLKPVP
VPDPEEAVREGRFPAGVVFREGAYRVFGRLASGLGESQVVVEKVKGALQALKEAQVAEALVRAGLPKEILSPFAVEVVDA
SPPKEKAGGLLGFLLPFFLVVFVLSGGQVVAVDATAGEKEKGTLEALLAAPVPLVQVALGKTLATVAMALLSGVAGLLGL
ALGGAWSARFGGGVLTERGETLALGGQVSLDGGSFLALFLTAFLLALFMGAVMVALGLYARSFKEAQSYMAPLQLLFLLP
LLFLQFRGFLEIEAWHYLLPLFNVALLMDALLKGSATPLEVGLTWASTLVYALLALGLAVWVFGREDVVFRN

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41770; Mature: 41770

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAVLRLFRKELIQVFRDRKLLFSTLVLPVLLMPVFMFGPSLFLSRLLQGAAERVQEVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
AGLPEEALKALEAARLKPVPVPDPEEAVREGRFPAGVVFREGAYRVFGRLASGLGESQVV
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHH
VEKVKGALQALKEAQVAEALVRAGLPKEILSPFAVEVVDASPPKEKAGGLLGFLLPFFLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFVLSGGQVVAVDATAGEKEKGTLEALLAAPVPLVQVALGKTLATVAMALLSGVAGLLGL
HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGAWSARFGGGVLTERGETLALGGQVSLDGGSFLALFLTAFLLALFMGAVMVALGLYA
HHCCCHHHHCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSFKEAQSYMAPLQLLFLLPLLFLQFRGFLEIEAWHYLLPLFNVALLMDALLKGSATPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VGLTWASTLVYALLALGLAVWVFGREDVVFRN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEAVLRLFRKELIQVFRDRKLLFSTLVLPVLLMPVFMFGPSLFLSRLLQGAAERVQEVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
AGLPEEALKALEAARLKPVPVPDPEEAVREGRFPAGVVFREGAYRVFGRLASGLGESQVV
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHCHHHHHHHHHHHCCCCHHHH
VEKVKGALQALKEAQVAEALVRAGLPKEILSPFAVEVVDASPPKEKAGGLLGFLLPFFLV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
VFVLSGGQVVAVDATAGEKEKGTLEALLAAPVPLVQVALGKTLATVAMALLSGVAGLLGL
HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGGAWSARFGGGVLTERGETLALGGQVSLDGGSFLALFLTAFLLALFMGAVMVALGLYA
HHCCCHHHHCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSFKEAQSYMAPLQLLFLLPLLFLQFRGFLEIEAWHYLLPLFNVALLMDALLKGSATPLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VGLTWASTLVYALLALGLAVWVFGREDVVFRN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9106203; 9384377 [H]