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The map label for this gene is lysW

Identifier: 55981877

GI number: 55981877

Start: 1792681

End: 1792845

Strand: Reverse

Name: lysW

Synonym: TTHA1908

Alternate gene names: 55981877

Gene position: 1792845-1792681 (Counterclockwise)

Preceding gene: 55981878

Following gene: 55981876

Centisome position: 96.92

GC content: 67.88

Gene sequence:

>165_bases
ATGGTAGGAACCTGCCCTGAGTGCGGTGCGGAACTGCGGCTGGAGAACCCGGAGCTTGGCGAGCTTGTGGTCTGCGAGGA
CTGCGGCGCGGAGCTTGAGGTGGTGGGGCTTGACCCCTTGAGGCTCGAGCCCGCCCCGGAGGAGGCGGAAGACTGGGGCG
AGTGA

Upstream 100 bases:

>100_bases
CCTTTGAGCTCTCCGAGGAGGACCAGGGCCGGGAGGTGGAGTGCCCCGAGTGCGGCTTCCGCTTTGTCCCCGACTGGAGC
GACCTAGAGGAGGACGAGGA

Downstream 100 bases:

>100_bases
TCCCACCCCACGCCGGCCTAGGCCGGCGTGGGGGCCCCGGCGGCGCCACCCCATGCCGGCCTGCGCCCCTGGCAGGGCCT
GGCGCCCTCTTTCCCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: AAA carrier protein lysW

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MVGTCPECGAELRLENPELGELVVCEDCGAELEVVGLDPLRLEPAPEEAEDWGE

Sequences:

>Translated_54_residues
MVGTCPECGAELRLENPELGELVVCEDCGAELEVVGLDPLRLEPAPEEAEDWGE
>Mature_54_residues
MVGTCPECGAELRLENPELGELVVCEDCGAELEVVGLDPLRLEPAPEEAEDWGE

Specific function: Carries the different intermediates in the biosynthesis of L-lysine, from alpha-aminodipate to the final lysine residue

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TFIIB-type zinc finger

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LYSW_THET8 (Q5SH22)

Other databases:

- EMBL:   AP008226
- RefSeq:   YP_145174.1
- ProteinModelPortal:   Q5SH22
- STRING:   Q5SH22
- GeneID:   3167976
- GenomeReviews:   AP008226_GR
- KEGG:   ttj:TTHA1908
- NMPDR:   fig|300852.3.peg.1519
- eggNOG:   NOG69579
- HOGENOM:   HBG728335
- OMA:   IVDCATC
- ProtClustDB:   CLSK2766776
- BioCyc:   TTHE300852:TTHA1908-MONOMER
- InterPro:   IPR005906
- InterPro:   IPR013137
- TIGRFAMs:   TIGR01206

Pfam domain/function: PF08271 TFIIB_Zn_Ribbon

EC number: NA

Molecular weight: Translated: 5813; Mature: 5813

Theoretical pI: Translated: 3.35; Mature: 3.35

Prosite motif: PS51134 ZF_TFIIB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGTCPECGAELRLENPELGELVVCEDCGAELEVVGLDPLRLEPAPEEAEDWGE
CCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MVGTCPECGAELRLENPELGELVVCEDCGAELEVVGLDPLRLEPAPEEAEDWGE
CCCCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEECCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA