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The map label for this gene is ugpB [H]

Identifier: 55981846

GI number: 55981846

Start: 1762881

End: 1764065

Strand: Direct

Name: ugpB [H]

Synonym: TTHA1877

Alternate gene names: 55981846

Gene position: 1762881-1764065 (Clockwise)

Preceding gene: 55981845

Following gene: 55981851

Centisome position: 95.3

GC content: 71.05

Gene sequence:

>1185_bases
ATGAGGGGACTTCCCGCCCTTCTGCCCGTTCTTTCCCTGGCCTTGGCCCAGACGGTCATCCCCTTCTGGCACACCGCAGG
CCCCCCCGGCGACCGGGTCCTGGAGGAGGCGATCCGCTCCTTCAACGCGGGCCAGAACGCCTACCGGCTCGAGGCCCGGT
ACGTGGGGGACTACCGCGAGGCCGGGGTGAAGCTCCTCGCCGCCCTGCGCTCCGGCAGGCCGCCTGCCCTCTTCCACGCC
GAGCTCTCCTTCCTGCCCCGCCTCGCCAAGGAGGGGCTCGCCCTTCCCCTGGACGCCTACCTCCAGGACCTGCCCCAGGA
CCTCTACCCCGCCCCCCTGAAGGCAGGCCAGGTGGGGGGAAGGACCTACGGCCTTCCCCTCGGGGTCTCGGTCCCCGCCC
TCTACTACAACAAGGACGCCTTCCGCGCCAAGGGGCTTAAGCCCCCCATGACCTGGGCCGAGGTGGAGCGGGCGGCGGAG
GCGCTCACCAGCCGCACCGCCAAGGGGATGGTGATCGCCACCGACGTGTGGAGCTTCAACGCCATCGTCATGAGCCTGGG
GGGAAGCCTGGTGAAGGACGGGCTTCCCGCCTTCACCTCCAAGGAGGCGGTGGAGGCCCTGGAGATGCTTTACCGCATGG
TGCAAAAGGGGCACGCCCAGGCCAGGAACCTGGCGGAGGCCCAGTTCGCCGTGGCCGACTTCCTCAGGACCAAGGCCTTC
ATGGGGATCGGCCCCACCACGGCCCTCCCTGTGGTCCTGGCCCAGACCGCCCTCCCCTTCCAGGTGGGGTACGCCCCCTT
GCCCCGGGTCCCGGGCGGGGCCGTCCCCCTCTCGGGGGCGGTCCTCGTGGTCCTCAAGGGGGCGGGCCCCGAGGAGGCCC
GGGGGGCGGTGGCCTTCTGGCGCCACTTCCTGGAACCCAAGCGCCAGGCGGACTGGGTGCGCACCACCTGGTACCTGCCC
TTGAGGCGGGCGGCGGAGGCCGAGCTTAAGGACTTCCTCCAGGAACCCGAGCGGCGCGCGGTCTTCGCCCAGGTGGAGGC
GGCCCGTCCCTGGAGCCAGGACCCCGAGCTTGTGGTCTGGTACGGCTACCTGGAGGAGGCCCTGGAGAAAAGCCTCAAGC
AGGGGGTGAAGCCCAGGGTGGCCCTGGAGGAGGCCCAGAAGAAGGCCCTGGCGGCGGAGCGTTGA

Upstream 100 bases:

>100_bases
TCGGCCCGGGAGGAGCTGAGGGCCCGGGCGGCCCCCTTCCTCAAGGGCCTTTCCCTTCTCCTTTCAGACCTCTCACCCGT
TTCCCGGTAGGCTTAGGGGC

Downstream 100 bases:

>100_bases
CCGGGCGGGGCCTTAGGCCGTCCCGTCCCTGAGGTGGCTCAAAAACTCCTCCCGGGTCTTCTGGTTCTCCCGGAAGACCC
CCAGCATGGCGCTCGTCACG

Product: sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRGLPALLPVLSLALAQTVIPFWHTAGPPGDRVLEEAIRSFNAGQNAYRLEARYVGDYREAGVKLLAALRSGRPPALFHA
ELSFLPRLAKEGLALPLDAYLQDLPQDLYPAPLKAGQVGGRTYGLPLGVSVPALYYNKDAFRAKGLKPPMTWAEVERAAE
ALTSRTAKGMVIATDVWSFNAIVMSLGGSLVKDGLPAFTSKEAVEALEMLYRMVQKGHAQARNLAEAQFAVADFLRTKAF
MGIGPTTALPVVLAQTALPFQVGYAPLPRVPGGAVPLSGAVLVVLKGAGPEEARGAVAFWRHFLEPKRQADWVRTTWYLP
LRRAAEAELKDFLQEPERRAVFAQVEAARPWSQDPELVVWYGYLEEALEKSLKQGVKPRVALEEAQKKALAAER

Sequences:

>Translated_394_residues
MRGLPALLPVLSLALAQTVIPFWHTAGPPGDRVLEEAIRSFNAGQNAYRLEARYVGDYREAGVKLLAALRSGRPPALFHA
ELSFLPRLAKEGLALPLDAYLQDLPQDLYPAPLKAGQVGGRTYGLPLGVSVPALYYNKDAFRAKGLKPPMTWAEVERAAE
ALTSRTAKGMVIATDVWSFNAIVMSLGGSLVKDGLPAFTSKEAVEALEMLYRMVQKGHAQARNLAEAQFAVADFLRTKAF
MGIGPTTALPVVLAQTALPFQVGYAPLPRVPGGAVPLSGAVLVVLKGAGPEEARGAVAFWRHFLEPKRQADWVRTTWYLP
LRRAAEAELKDFLQEPERRAVFAQVEAARPWSQDPELVVWYGYLEEALEKSLKQGVKPRVALEEAQKKALAAER
>Mature_394_residues
MRGLPALLPVLSLALAQTVIPFWHTAGPPGDRVLEEAIRSFNAGQNAYRLEARYVGDYREAGVKLLAALRSGRPPALFHA
ELSFLPRLAKEGLALPLDAYLQDLPQDLYPAPLKAGQVGGRTYGLPLGVSVPALYYNKDAFRAKGLKPPMTWAEVERAAE
ALTSRTAKGMVIATDVWSFNAIVMSLGGSLVKDGLPAFTSKEAVEALEMLYRMVQKGHAQARNLAEAQFAVADFLRTKAF
MGIGPTTALPVVLAQTALPFQVGYAPLPRVPGGAVPLSGAVLVVLKGAGPEEARGAVAFWRHFLEPKRQADWVRTTWYLP
LRRAAEAELKDFLQEPERRAVFAQVEAARPWSQDPELVVWYGYLEEALEKSLKQGVKPRVALEEAQKKALAAER

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=342, Percent_Identity=25.4385964912281, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43028; Mature: 43028

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLPALLPVLSLALAQTVIPFWHTAGPPGDRVLEEAIRSFNAGQNAYRLEARYVGDYRE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHH
AGVKLLAALRSGRPPALFHAELSFLPRLAKEGLALPLDAYLQDLPQDLYPAPLKAGQVGG
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
RTYGLPLGVSVPALYYNKDAFRAKGLKPPMTWAEVERAAEALTSRTAKGMVIATDVWSFN
EEECCCCCCCCCHHEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHH
AIVMSLGGSLVKDGLPAFTSKEAVEALEMLYRMVQKGHAQARNLAEAQFAVADFLRTKAF
HHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGIGPTTALPVVLAQTALPFQVGYAPLPRVPGGAVPLSGAVLVVLKGAGPEEARGAVAFW
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
RHFLEPKRQADWVRTTWYLPLRRAAEAELKDFLQEPERRAVFAQVEAARPWSQDPELVVW
HHHHCHHHHCCHHHHEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEE
YGYLEEALEKSLKQGVKPRVALEEAQKKALAAER
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRGLPALLPVLSLALAQTVIPFWHTAGPPGDRVLEEAIRSFNAGQNAYRLEARYVGDYRE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHH
AGVKLLAALRSGRPPALFHAELSFLPRLAKEGLALPLDAYLQDLPQDLYPAPLKAGQVGG
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
RTYGLPLGVSVPALYYNKDAFRAKGLKPPMTWAEVERAAEALTSRTAKGMVIATDVWSFN
EEECCCCCCCCCHHEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHH
AIVMSLGGSLVKDGLPAFTSKEAVEALEMLYRMVQKGHAQARNLAEAQFAVADFLRTKAF
HHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGIGPTTALPVVLAQTALPFQVGYAPLPRVPGGAVPLSGAVLVVLKGAGPEEARGAVAFW
HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
RHFLEPKRQADWVRTTWYLPLRRAAEAELKDFLQEPERRAVFAQVEAARPWSQDPELVVW
HHHHCHHHHCCHHHHEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCEEEE
YGYLEEALEKSLKQGVKPRVALEEAQKKALAAER
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA