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The map label for this gene is slpA [H]

Identifier: 55981833

GI number: 55981833

Start: 1746121

End: 1747440

Strand: Direct

Name: slpA [H]

Synonym: TTHA1864

Alternate gene names: 55981833

Gene position: 1746121-1747440 (Clockwise)

Preceding gene: 55981832

Following gene: 55981836

Centisome position: 94.4

GC content: 68.03

Gene sequence:

>1320_bases
ATGAAGCAGCTTCGCTACTTGTTGGTCCTGAGCCTCGTCGGGGGCACCCTAAGCTTGTCGCAAAGTCAGGATGCCCCCCC
TTCCCCTTGGGCCGAGGAAGCGGTGAGGATCCTTGTGGCGAAAGGAGTCTTCATCGGATACCCTGACGGCTCCTTCCGCT
GGCGGGAACCCATGACCCGCCAAGAAGCAGCGTTGGCCCTTTACCGCCTACTGGCCGCCTATGGGCTAGACCGGCTTTCC
CCCGAGGAGGTGGACCGCCTCCTCAAAGGGGTGGAGGCCTTGCAGAAGGACCTCGAGGCCCAGGCCCGGTCCCTGGCCGC
CCTCAAAGAGGAGAAGGAGGCCCTGGAGACCAGGGTACGGGAGCTGGAGGCCAAGCCCGGGGCGGACCCCGAAGCCCTCG
AGGCCCTCCGCAAGGAGAAGGACGACCTGGCCCGGCGGGTTCAGGCCCTGGAGGAGGCCCTAAAGGTCCTCGAGGCCGCG
CAAAAGGCCCTGGAGGCAAAAAGGCTTGAGGAAAACCTCAAGGGGACGGAAGCCTCCCTGAAGACTCTGGAGGAGCGCCT
TAAGGCCCTGGAAGCCCGCCCCCAGGCCGACCCCAAGGAGGTGGAGGCCCTGAGGCGGGCCCAGGAGGAGCTTAAAGGCC
GCCTCGAGGCCCTGGAGAAGGCCCGCTCCGCCCAGGAGGAGGCCCTAAGGCGCCTGGAAGAGGCCCTAAAGGACCTCCCC
GAAGCCACGCGCCTGGCCCAGGAGGCCCAAGACCGCCTGCAAGCCCTGGAGCCCCGCCTCCAGAGGGCCGAGGAAGGCCT
GGAGGCCTTGGAGAACCGGGTCCGGTCCTTGGAGGAAAGGCTTAAAGCTCTGGAGGCCGCCCAGGCCCAGGACCAGGCCC
GCCTGAAAGCCCTGGAGGAGGAGGTGGCCGCCCTCAAGCGCGCCCTCACCCCAAGCCGCCTCCCCCTCCACCTGGGCCTC
GCCCTCTACCAGGGGGACGTGCAGAGGGACTGGCATGGCCGCCTCTTCCTGGGCCACGACGCCCTCATTGGCCCCTTGGG
CCTGCGCTTGGCCTACGAGGCCCCCTTCGCCGAGCCCGCCCAGGGCCTCGCCAGCCTGGACCTCACCTTCCGCGCCTCCT
ACGGCGACCTGGACGGTTACTTTGGGGTAGGAGGGGGGCTTTACCTGGGTGGCCCCTCCTTCGGCCAGCTCCTGGTGGGC
GCCGGGTTCCGCCTGGTACCCCACTTAAGCCTCTTCCTGGAAGGCCACCAGCGCTACCTCTTTGACAGCCAGGCCAGCCA
GCGCTCCACCATAGCTTTCGGCCTGGCCCTGCGGCTCTAA

Upstream 100 bases:

>100_bases
GCCCTGATGCTCCTCATCGGAAAGGCCCACCACCTGCTCTGAGAACGAGGAAGGCACTCTGGGGGCACCTTGCCCTCCAG
GTTGATTATTGGAGGAACTC

Downstream 100 bases:

>100_bases
GCAAATCCCTAGGGCAGAGAAAAGGTCAGGGGAAGAAGGCAAGAGAAGCCCGGAGTCAGGCTTAAGCTTTGCTCCAGAAA
CCACCTTCCCTGAGGGGTAG

Product: S-layer protein-like protein

Products: NA

Alternate protein names: P100 protein; Surface layer protein [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKQLRYLLVLSLVGGTLSLSQSQDAPPSPWAEEAVRILVAKGVFIGYPDGSFRWREPMTRQEAALALYRLLAAYGLDRLS
PEEVDRLLKGVEALQKDLEAQARSLAALKEEKEALETRVRELEAKPGADPEALEALRKEKDDLARRVQALEEALKVLEAA
QKALEAKRLEENLKGTEASLKTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDLP
EATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALEEEVAALKRALTPSRLPLHLGL
ALYQGDVQRDWHGRLFLGHDALIGPLGLRLAYEAPFAEPAQGLASLDLTFRASYGDLDGYFGVGGGLYLGGPSFGQLLVG
AGFRLVPHLSLFLEGHQRYLFDSQASQRSTIAFGLALRL

Sequences:

>Translated_439_residues
MKQLRYLLVLSLVGGTLSLSQSQDAPPSPWAEEAVRILVAKGVFIGYPDGSFRWREPMTRQEAALALYRLLAAYGLDRLS
PEEVDRLLKGVEALQKDLEAQARSLAALKEEKEALETRVRELEAKPGADPEALEALRKEKDDLARRVQALEEALKVLEAA
QKALEAKRLEENLKGTEASLKTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDLP
EATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALEEEVAALKRALTPSRLPLHLGL
ALYQGDVQRDWHGRLFLGHDALIGPLGLRLAYEAPFAEPAQGLASLDLTFRASYGDLDGYFGVGGGLYLGGPSFGQLLVG
AGFRLVPHLSLFLEGHQRYLFDSQASQRSTIAFGLALRL
>Mature_439_residues
MKQLRYLLVLSLVGGTLSLSQSQDAPPSPWAEEAVRILVAKGVFIGYPDGSFRWREPMTRQEAALALYRLLAAYGLDRLS
PEEVDRLLKGVEALQKDLEAQARSLAALKEEKEALETRVRELEAKPGADPEALEALRKEKDDLARRVQALEEALKVLEAA
QKALEAKRLEENLKGTEASLKTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDLP
EATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALEEEVAALKRALTPSRLPLHLGL
ALYQGDVQRDWHGRLFLGHDALIGPLGLRLAYEAPFAEPAQGLASLDLTFRASYGDLDGYFGVGGGLYLGGPSFGQLLVG
AGFRLVPHLSLFLEGHQRYLFDSQASQRSTIAFGLALRL

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 48718; Mature: 48718

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLRYLLVLSLVGGTLSLSQSQDAPPSPWAEEAVRILVAKGVFIGYPDGSFRWREPMTR
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHH
QEAALALYRLLAAYGLDRLSPEEVDRLLKGVEALQKDLEAQARSLAALKEEKEALETRVR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEAKPGADPEALEALRKEKDDLARRVQALEEALKVLEAAQKALEAKRLEENLKGTEASL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAALKRALTPSRLPLHLGLALYQGDVQRDWHGRLFLGHDALIGPLGLRLAYEAPFAEPA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHEECCCCCCHH
QGLASLDLTFRASYGDLDGYFGVGGGLYLGGPSFGQLLVGAGFRLVPHLSLFLEGHQRYL
HHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FDSQASQRSTIAFGLALRL
HCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKQLRYLLVLSLVGGTLSLSQSQDAPPSPWAEEAVRILVAKGVFIGYPDGSFRWREPMTR
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHH
QEAALALYRLLAAYGLDRLSPEEVDRLLKGVEALQKDLEAQARSLAALKEEKEALETRVR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEAKPGADPEALEALRKEKDDLARRVQALEEALKVLEAAQKALEAKRLEENLKGTEASL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KTLEERLKALEARPQADPKEVEALRRAQEELKGRLEALEKARSAQEEALRRLEEALKDLP
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
EATRLAQEAQDRLQALEPRLQRAEEGLEALENRVRSLEERLKALEAAQAQDQARLKALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVAALKRALTPSRLPLHLGLALYQGDVQRDWHGRLFLGHDALIGPLGLRLAYEAPFAEPA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHEECCCCCCHH
QGLASLDLTFRASYGDLDGYFGVGGGLYLGGPSFGQLLVGAGFRLVPHLSLFLEGHQRYL
HHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FDSQASQRSTIAFGLALRL
HCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA