| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981761
Identifier: 55981761
GI number: 55981761
Start: 1675317
End: 1675646
Strand: Direct
Name: 55981761
Synonym: TTHA1792
Alternate gene names: NA
Gene position: 1675317-1675646 (Clockwise)
Preceding gene: 55981760
Following gene: 55981763
Centisome position: 90.57
GC content: 69.7
Gene sequence:
>330_bases GTGGGAACCGTGGAGCTACCCGACCTCACCCCCTACCTGGGCCAGATCACCTTTGGCGGCCTCGCCGGCTACGCCGTGGG CTACGCCCTGAAGAAGGTGGGGCGGCTTCTGGCCATCGCCCTCGGCCTCCTCTTCGTGGCCCTCCAGCTCCTGGCCCAGG CGGGCTACGTGGAGGTGGACTGGACCCGGATCCAGCGGGACGTGGAGCCCCTTTTGCAACAGCCCGCCCTCCGAAACCTT TGGGACAGGCTCCTCGCCACCCTCACCCACAACCTCCCCTTCGGCGCGAGCTTCGTGGGCGGCCTCGTCCTGGGCCTCAG GGCCGGCTGA
Upstream 100 bases:
>100_bases CTCGAGGCCATGAAGCAGGAGGCCCGCCTCCTCGGCCTGGAGGGCGCCTAACGGCCCGGGCGCAAAAGGGCGCTTGCCCC GCCGCCCTCCCCGCGCTAGG
Downstream 100 bases:
>100_bases GCCAAGCCACCCCCAAGGCGAGGAGGAGGGCCCTAGCCGCCATCCTTAGGGGTCCAGCGCGAGCGGTCCCGGGCCCGGTA CTTGGCCATGACCCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Fun14 Family Protein
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MGTVELPDLTPYLGQITFGGLAGYAVGYALKKVGRLLAIALGLLFVALQLLAQAGYVEVDWTRIQRDVEPLLQQPALRNL WDRLLATLTHNLPFGASFVGGLVLGLRAG
Sequences:
>Translated_109_residues MGTVELPDLTPYLGQITFGGLAGYAVGYALKKVGRLLAIALGLLFVALQLLAQAGYVEVDWTRIQRDVEPLLQQPALRNL WDRLLATLTHNLPFGASFVGGLVLGLRAG >Mature_108_residues GTVELPDLTPYLGQITFGGLAGYAVGYALKKVGRLLAIALGLLFVALQLLAQAGYVEVDWTRIQRDVEPLLQQPALRNLW DRLLATLTHNLPFGASFVGGLVLGLRAG
Specific function: Unknown
COG id: COG2383
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI28603830, Length=101, Percent_Identity=35.6435643564356, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11717; Mature: 11586
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVELPDLTPYLGQITFGGLAGYAVGYALKKVGRLLAIALGLLFVALQLLAQAGYVEVD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WTRIQRDVEPLLQQPALRNLWDRLLATLTHNLPFGASFVGGLVLGLRAG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GTVELPDLTPYLGQITFGGLAGYAVGYALKKVGRLLAIALGLLFVALQLLAQAGYVEVD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WTRIQRDVEPLLQQPALRNLWDRLLATLTHNLPFGASFVGGLVLGLRAG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA