Definition Thermus thermophilus HB8 chromosome, complete genome.
Accession NC_006461
Length 1,849,742

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The map label for this gene is 55981755

Identifier: 55981755

GI number: 55981755

Start: 1670880

End: 1672343

Strand: Direct

Name: 55981755

Synonym: TTHA1786

Alternate gene names: NA

Gene position: 1670880-1672343 (Clockwise)

Preceding gene: 55981754

Following gene: 55981756

Centisome position: 90.33

GC content: 72.34

Gene sequence:

>1464_bases
ATGAGGCGGTTCGCCCTCCTCCTCTTTTTCGGCCTCGCCCTGGGCCAAACCCTCCTTCCCGTGGAAGAGCTGGGGCTCAC
CTTCCGGGAGGAAGGGGGGGCCTGGGTGTACCAGGGGGGCGGGAAGCGCTTCGTCTACGTCCCCGGGGTGGGCTGGGCCG
AGCCCCTTGGGGCGGAGCTCCCCCCGCCCCAAGAGGGCCTCTTTCCCTTGGAGGCCCTAAAGGCCCTGGGCCACTTCCGG
GTGCCCGAGGCGGGGGTGCGCTTCGGGGAGAAGCCCAAAGGCCTCCGGGTGGTCCTGGACCTGCCCGCCCCCTACCCGGC
CGAGCCCCGGGAAGAGCGGGGTAAGGCGGGGGCCACCCTCTACCTGCCCTACCTCGCCCCGGACCTCCTCAAGGCCCCCT
GGCCTAAGGGCCTAAAGGCCAAGGTCCGCCTTCTCCCCGAGGCCACCGAGCTCGCCCTGAGGGCGGAACAGGGCCACCTC
TACTACCGCCTCTTTCCCCTCGAGGACCCCCCCCGCCTGGTCCTGGACCTCTACCTCCTCGCCCCCGAGGTGGAGGAGGT
TCTGGCCCCCGGGGTGCGCTACCGGGAGGTCTACGGCTTCACCCCCGAGCCCCTGAGGCTTTACCTGGTGGAGGCGGAGC
GGGGAAGGCTCCTCCCCGTGGGCACCCCGGGGAAGAGGGCGCTTCCCAAGGACCTGGCCCCGGGGGCCCTCGCCGTCCTG
AACGGGGGGTACTTTGACCCGAAGAGCGGGACCCCCATCGGGCTTTGGGTGCAGGACGGGGTGACCCTCTCCTACCCCTA
CGGCCGGGTGGCCCTCCTCTGGGACGGGTTCGCCTTCTTTCTGGGCTTCCCCCAGTTCGTCGCCGAGGCGGTGGGGCCGG
ACGGGAGCCGGGTACGGGTGGGGGTGAACGCCTCCCGCGCCCGCTACACCGCCCACACGGTGCCGGGCCTGGTGGGCCGG
GAGGGGGAAGGGGTGGCCCTGGTGCGGGAGGACCGGGTGGTGGCCCTCCTCCCCGCCCCGGCCGAGCTTCCCCCGGGGCA
CTGGGCCCTCACCTTCCCCAGGGATGCCCCTCCTTTTCCCCTCGAGGTGGGGGGCAGGCTCGCCCTCTACGGCACCCTCA
ACCCCCCCTTCCGCTACGCCCTGGAGGGAGGCCCCCTCCTCCTCAAGGAGGGCCGGTACGCCTACGACCCCGCCAAGGAG
AACTTCAAGGACCCGAGACCCCTTCAGGCCGTGGCCCCCCAGGCGGCGGTGGCCTGGACGAAGGAGGGGAAGCTCTGGCT
CCTCGTCTCCGAACCCACCACCCCCGGGGCCCTGGCCCGGGCCCTCCTCTCCTTAGGCGCCTGGAACGCGCTCAGGATGG
ACGGGGGGGGTTCGGCCCAGCTCTGGGTGAAGGGGCAGCTCAGGAGCCCCTACACGGGCTCCCCCAGGCCCGTGGTGAAC
GCCCTGGCCCTCTACCTCCCCTAA

Upstream 100 bases:

>100_bases
CCCCGGCAAAGGGCTTCCTCGGGCTGGCTGGGCCACGGAAGCTCGGCAAAAGGGTATAAGGCTCCATCCGCTTCTCAGGA
AGGTTTGGTTTCCTAGGAGG

Downstream 100 bases:

>100_bases
GGGGGATAATGCCCTTGTGGGCCCCGGCTTCCACCGGCTTTACGCCGACCGCCTGGCCTGGCGGTACCGCCTCCTCTTGG
CCCTTGCCCTCGCCCTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR
VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL
YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL
NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR
EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE
NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN
ALALYLP

Sequences:

>Translated_487_residues
MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR
VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL
YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL
NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR
EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE
NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN
ALALYLP
>Mature_487_residues
MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR
VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL
YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL
NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR
EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE
NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN
ALALYLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52951; Mature: 52951

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAEL
CCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC
PPPQEGLFPLEALKALGHFRVPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATL
CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE
YLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHLYYRLFPLEDPPRLVLDLYLL
EEHHCCHHHHCCCCCCCCCEEEEECCCHHHEEEEECCCCEEEEEECCCCCCHHEEEEEHH
APEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL
CCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEE
NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRV
ECCEECCCCCCEEEEEEECCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHCCCCCEEEE
GVNASRARYTAHTVPGLVGREGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFP
ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCC
LEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKENFKDPRPLQAVAPQAAVAWT
CCCCCEEEEEECCCCCEEEEECCCCEEEECCCEEECCCHHCCCCCCCHHHHCCCEEEEEE
KEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN
CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHH
ALALYLP
HHEEECC
>Mature Secondary Structure
MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAEL
CCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC
PPPQEGLFPLEALKALGHFRVPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATL
CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE
YLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHLYYRLFPLEDPPRLVLDLYLL
EEHHCCHHHHCCCCCCCCCEEEEECCCHHHEEEEECCCCEEEEEECCCCCCHHEEEEEHH
APEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL
CCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEE
NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRV
ECCEECCCCCCEEEEEEECCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHCCCCCEEEE
GVNASRARYTAHTVPGLVGREGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFP
ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCC
LEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKENFKDPRPLQAVAPQAAVAWT
CCCCCEEEEEECCCCCEEEEECCCCEEEECCCEEECCCHHCCCCCCCHHHHCCCEEEEEE
KEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN
CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHH
ALALYLP
HHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA