| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981755
Identifier: 55981755
GI number: 55981755
Start: 1670880
End: 1672343
Strand: Direct
Name: 55981755
Synonym: TTHA1786
Alternate gene names: NA
Gene position: 1670880-1672343 (Clockwise)
Preceding gene: 55981754
Following gene: 55981756
Centisome position: 90.33
GC content: 72.34
Gene sequence:
>1464_bases ATGAGGCGGTTCGCCCTCCTCCTCTTTTTCGGCCTCGCCCTGGGCCAAACCCTCCTTCCCGTGGAAGAGCTGGGGCTCAC CTTCCGGGAGGAAGGGGGGGCCTGGGTGTACCAGGGGGGCGGGAAGCGCTTCGTCTACGTCCCCGGGGTGGGCTGGGCCG AGCCCCTTGGGGCGGAGCTCCCCCCGCCCCAAGAGGGCCTCTTTCCCTTGGAGGCCCTAAAGGCCCTGGGCCACTTCCGG GTGCCCGAGGCGGGGGTGCGCTTCGGGGAGAAGCCCAAAGGCCTCCGGGTGGTCCTGGACCTGCCCGCCCCCTACCCGGC CGAGCCCCGGGAAGAGCGGGGTAAGGCGGGGGCCACCCTCTACCTGCCCTACCTCGCCCCGGACCTCCTCAAGGCCCCCT GGCCTAAGGGCCTAAAGGCCAAGGTCCGCCTTCTCCCCGAGGCCACCGAGCTCGCCCTGAGGGCGGAACAGGGCCACCTC TACTACCGCCTCTTTCCCCTCGAGGACCCCCCCCGCCTGGTCCTGGACCTCTACCTCCTCGCCCCCGAGGTGGAGGAGGT TCTGGCCCCCGGGGTGCGCTACCGGGAGGTCTACGGCTTCACCCCCGAGCCCCTGAGGCTTTACCTGGTGGAGGCGGAGC GGGGAAGGCTCCTCCCCGTGGGCACCCCGGGGAAGAGGGCGCTTCCCAAGGACCTGGCCCCGGGGGCCCTCGCCGTCCTG AACGGGGGGTACTTTGACCCGAAGAGCGGGACCCCCATCGGGCTTTGGGTGCAGGACGGGGTGACCCTCTCCTACCCCTA CGGCCGGGTGGCCCTCCTCTGGGACGGGTTCGCCTTCTTTCTGGGCTTCCCCCAGTTCGTCGCCGAGGCGGTGGGGCCGG ACGGGAGCCGGGTACGGGTGGGGGTGAACGCCTCCCGCGCCCGCTACACCGCCCACACGGTGCCGGGCCTGGTGGGCCGG GAGGGGGAAGGGGTGGCCCTGGTGCGGGAGGACCGGGTGGTGGCCCTCCTCCCCGCCCCGGCCGAGCTTCCCCCGGGGCA CTGGGCCCTCACCTTCCCCAGGGATGCCCCTCCTTTTCCCCTCGAGGTGGGGGGCAGGCTCGCCCTCTACGGCACCCTCA ACCCCCCCTTCCGCTACGCCCTGGAGGGAGGCCCCCTCCTCCTCAAGGAGGGCCGGTACGCCTACGACCCCGCCAAGGAG AACTTCAAGGACCCGAGACCCCTTCAGGCCGTGGCCCCCCAGGCGGCGGTGGCCTGGACGAAGGAGGGGAAGCTCTGGCT CCTCGTCTCCGAACCCACCACCCCCGGGGCCCTGGCCCGGGCCCTCCTCTCCTTAGGCGCCTGGAACGCGCTCAGGATGG ACGGGGGGGGTTCGGCCCAGCTCTGGGTGAAGGGGCAGCTCAGGAGCCCCTACACGGGCTCCCCCAGGCCCGTGGTGAAC GCCCTGGCCCTCTACCTCCCCTAA
Upstream 100 bases:
>100_bases CCCCGGCAAAGGGCTTCCTCGGGCTGGCTGGGCCACGGAAGCTCGGCAAAAGGGTATAAGGCTCCATCCGCTTCTCAGGA AGGTTTGGTTTCCTAGGAGG
Downstream 100 bases:
>100_bases GGGGGATAATGCCCTTGTGGGCCCCGGCTTCCACCGGCTTTACGCCGACCGCCTGGCCTGGCGGTACCGCCTCCTCTTGG CCCTTGCCCTCGCCCTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN ALALYLP
Sequences:
>Translated_487_residues MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN ALALYLP >Mature_487_residues MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAELPPPQEGLFPLEALKALGHFR VPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATLYLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHL YYRLFPLEDPPRLVLDLYLLAPEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRVGVNASRARYTAHTVPGLVGR EGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFPLEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKE NFKDPRPLQAVAPQAAVAWTKEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN ALALYLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52951; Mature: 52951
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAEL CCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC PPPQEGLFPLEALKALGHFRVPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATL CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE YLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHLYYRLFPLEDPPRLVLDLYLL EEHHCCHHHHCCCCCCCCCEEEEECCCHHHEEEEECCCCEEEEEECCCCCCHHEEEEEHH APEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL CCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEE NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRV ECCEECCCCCCEEEEEEECCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHCCCCCEEEE GVNASRARYTAHTVPGLVGREGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFP ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCC LEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKENFKDPRPLQAVAPQAAVAWT CCCCCEEEEEECCCCCEEEEECCCCEEEECCCEEECCCHHCCCCCCCHHHHCCCEEEEEE KEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHH ALALYLP HHEEECC >Mature Secondary Structure MRRFALLLFFGLALGQTLLPVEELGLTFREEGGAWVYQGGGKRFVYVPGVGWAEPLGAEL CCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCEEEEECCCEEEEEECCCCCCCCCCCCC PPPQEGLFPLEALKALGHFRVPEAGVRFGEKPKGLRVVLDLPAPYPAEPREERGKAGATL CCCCCCCCHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCEE YLPYLAPDLLKAPWPKGLKAKVRLLPEATELALRAEQGHLYYRLFPLEDPPRLVLDLYLL EEHHCCHHHHCCCCCCCCCEEEEECCCHHHEEEEECCCCEEEEEECCCCCCHHEEEEEHH APEVEEVLAPGVRYREVYGFTPEPLRLYLVEAERGRLLPVGTPGKRALPKDLAPGALAVL CCCHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCEEEEE NGGYFDPKSGTPIGLWVQDGVTLSYPYGRVALLWDGFAFFLGFPQFVAEAVGPDGSRVRV ECCEECCCCCCEEEEEEECCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHCCCCCEEEE GVNASRARYTAHTVPGLVGREGEGVALVREDRVVALLPAPAELPPGHWALTFPRDAPPFP ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCEEEECCCCCCCCC LEVGGRLALYGTLNPPFRYALEGGPLLLKEGRYAYDPAKENFKDPRPLQAVAPQAAVAWT CCCCCEEEEEECCCCCEEEEECCCCEEEECCCEEECCCHHCCCCCCCHHHHCCCEEEEEE KEGKLWLLVSEPTTPGALARALLSLGAWNALRMDGGGSAQLWVKGQLRSPYTGSPRPVVN CCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHHH ALALYLP HHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA