| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981738
Identifier: 55981738
GI number: 55981738
Start: 1657711
End: 1658082
Strand: Reverse
Name: 55981738
Synonym: TTHA1769
Alternate gene names: NA
Gene position: 1658082-1657711 (Counterclockwise)
Preceding gene: 55981739
Following gene: 55981737
Centisome position: 89.64
GC content: 71.24
Gene sequence:
>372_bases ATGGGGCGGATGCTGGGAAGAAAGGAGCGCACCCTCACCTACCTCGGCCCCGACACCGAGGTCCTGGGCGACATGAGGGC CAAGGGCCAGGTGCGCATTGACGGCCTGGTGCGGGGCTCCGTCCTGGTGGAGGGGGAGCTGGAGGTCGGCCCCACGGGCC GGGTGGAAGGGGAGCGGGTGGAGGCCAGGTCCGTCCTCATCCACGGCGAGGTCAAGGCGGAGCTCACCGCCGAGAAGGTG GTTCTCTCCAAGACGGCCCGCTTCACCGGCCAGCTCAAGGCCCAGGCCCTCGAGGTGGAGGCGGGGGCGGTCTTCGTGGG CCAGAGCGTGGCCGGGGAGCACAAGGCCCTCGAGGCCCCCAAGGAGGCCTGA
Upstream 100 bases:
>100_bases GGCCGGTCCACAGGGCCCCACCTCCACTACGGCGTCTACCGCTACGGGACGCCGGTGGACCCCAGGGCCTACCTGGACCC CACCTGGTACACCCGGTAGA
Downstream 100 bases:
>100_bases TGGCCCTGGAAAGGCTCTTCCGCAGAAAGCGCCCGAGCGGGGGCAACCGGGACGTCCCCGAGCTTTGGACCAAGTGCGAG GCCTGCGGGGCCCAGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MGRMLGRKERTLTYLGPDTEVLGDMRAKGQVRIDGLVRGSVLVEGELEVGPTGRVEGERVEARSVLIHGEVKAELTAEKV VLSKTARFTGQLKAQALEVEAGAVFVGQSVAGEHKALEAPKEA
Sequences:
>Translated_123_residues MGRMLGRKERTLTYLGPDTEVLGDMRAKGQVRIDGLVRGSVLVEGELEVGPTGRVEGERVEARSVLIHGEVKAELTAEKV VLSKTARFTGQLKAQALEVEAGAVFVGQSVAGEHKALEAPKEA >Mature_122_residues GRMLGRKERTLTYLGPDTEVLGDMRAKGQVRIDGLVRGSVLVEGELEVGPTGRVEGERVEARSVLIHGEVKAELTAEKVV LSKTARFTGQLKAQALEVEAGAVFVGQSVAGEHKALEAPKEA
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13122; Mature: 12991
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMLGRKERTLTYLGPDTEVLGDMRAKGQVRIDGLVRGSVLVEGELEVGPTGRVEGERV CCCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEEECEEEEEECEEECCCCCCCCCEE EARSVLIHGEVKAELTAEKVVLSKTARFTGQLKAQALEVEAGAVFVGQSVAGEHKALEAP EEEEEEEECCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECCCCCCCCCCCCC KEA CCC >Mature Secondary Structure GRMLGRKERTLTYLGPDTEVLGDMRAKGQVRIDGLVRGSVLVEGELEVGPTGRVEGERV CCCCCCCCCEEEEECCCHHHHCCCCCCCEEEEEEEEECEEEEEECEEECCCCCCCCCEE EARSVLIHGEVKAELTAEKVVLSKTARFTGQLKAQALEVEAGAVFVGQSVAGEHKALEAP EEEEEEEECCCEEEHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEECCCCCCCCCCCCC KEA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA