| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is mshB [H]
Identifier: 55981713
GI number: 55981713
Start: 1634832
End: 1635497
Strand: Direct
Name: mshB [H]
Synonym: TTHA1744
Alternate gene names: 55981713
Gene position: 1634832-1635497 (Clockwise)
Preceding gene: 55981707
Following gene: 55981714
Centisome position: 88.38
GC content: 72.82
Gene sequence:
>666_bases ATGGACCTCCTCGTGGTGGTGCCCCACCCGGACGACGAGAGCTTCGGCGCAGGGGGAGCCCTCCTCCTCGCCAAGGAGGC GGGGCTTAAGACCGGGGTCCTCACCCTGACCCGGGGGGAAGCCGGGAGAACCCTTGGCCTCTGTCCCCCGGAGGAGCTGC CCCAGGTGCGCGTGGAGGAGTTAAAGCGGGCCGCGGCCGTCCTTCAAGTGGACTACCTCGAGGTGCTGGACTACCCCAAC GCCCTCCCCGAGGGCGCCCAAGGGGAGCGGGGGCCGGCCACGGGCCGGGGCCTCGCCGACCACCCCGAGGCGGTGGAGGC GATCCGGACGCGGCTCCTCCGCCTCCGTCCCCGCTTCGTCCTCACCTTCCCCCCGGACGGCATCAACGGCCACCCCGACC ACGTGGCGGCGAGCCGCTACGCCCGCGAGGCCGCCCAAGGCCTCGCCCAGGTGGTCTACCTGGTCCGCCCCGACGGCCCC TGGCCCGTAACCCACCGCCTCCGCCTCCCCGAGAGGGTCTTGGCGCGGAAGCTCCAGGCCATCGCCCAGCACAAGACCCA GGCCCTCTCCGTGCTGAAGTTCCTGGAGATGTTCCCCGAGCGCCTCTGGACCGAGACCTTCCACCTGCCGGGCGCCTCCG GTCTCCGGGAGGGACCGTGGTGGTGA
Upstream 100 bases:
>100_bases CAGATGCTTGGCCTGTTCCCGCGCTTTCAAGATCCCCCGCCGGCCCTGCCGGCGCACCTATGAATCTACCAAGCCCCCCT CCTTCTGTCAAGATGGGGGC
Downstream 100 bases:
>100_bases GGCCCCTGGACCACACCGCCGACGTGGGGTTTGCCCTCGAGGCCCAAAGCCTGGAGGAGCTCTTTCAGGCGGCCCTGAAG GGCCTTCTAGACGTGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW
Sequences:
>Translated_221_residues MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW >Mature_221_residues MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEELKRAAAVLQVDYLEVLDYPN ALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFVLTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGP WPVTHRLRLPERVLARKLQAIAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW
Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MshB deacetylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003737 - InterPro: IPR017810 [H]
Pfam domain/function: PF02585 PIG-L [H]
EC number: =3.5.1.103 [H]
Molecular weight: Translated: 24309; Mature: 24309
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEE CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH LKRAAAVLQVDYLEVLDYPNALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE LTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGPWPVTHRLRLPERVLARKLQA EEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCCCCHHHHHHHHHH IAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDLLVVVPHPDDESFGAGGALLLAKEAGLKTGVLTLTRGEAGRTLGLCPPEELPQVRVEE CCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH LKRAAAVLQVDYLEVLDYPNALPEGAQGERGPATGRGLADHPEAVEAIRTRLLRLRPRFV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE LTFPPDGINGHPDHVAASRYAREAAQGLAQVVYLVRPDGPWPVTHRLRLPERVLARKLQA EEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHCCCCCHHHHHHHHHH IAQHKTQALSVLKFLEMFPERLWTETFHLPGASGLREGPWW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA