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The map label for this gene is pyrF [H]

Identifier: 55981712

GI number: 55981712

Start: 1632151

End: 1632924

Strand: Reverse

Name: pyrF [H]

Synonym: TTHA1743

Alternate gene names: 55981712

Gene position: 1632924-1632151 (Counterclockwise)

Preceding gene: 55981715

Following gene: 55981711

Centisome position: 88.28

GC content: 70.54

Gene sequence:

>774_bases
ATGGACTTCCTCGAGGCCCTTTCCCGGCCGCCCCTCGTTCTCGGCGTGGATCCGAGGCCGACGCTCCACGGCCCCGAGCC
CTTGGCCCATATCCGCCGCTACACCTTCGAGCTCCTCGAGGCCCTGGCCCCACGCCTTGCGGCGGCGAAGTTCCAGCTGG
CGTTCTTTGAGGCCTTGGGCCTCGAGGGGACGGCGCTGCTTTGGGAGCTCGCCAGCGCCTCCCGGGTCATGGGGCTTCCC
GTGATCTTTGACGGGAAGCGGGGGGACATCGGCTCCACCGCCGAGGCCTACGCCCGGGCCTACCTGGAGGCCTTCCCGGG
AAGCGCCCTCACCGTGAACCCGTACCTGGGCTTAGACGCCCTCAAGCCCTTCTTCCAGGCCGCTTCCCGCACAGGGGGCG
GGGTCTTCGTCCTGGCGAAGACCTCCAACCCCGGCTCCGGCTTCCTCCAGGACCTCCTTGTGGAGGAGAAGCCCCTTTAC
CTTCACCTGGCCGAGGCTCTTGAGCGGGAGGGGGAGGGGTACCGGGAGGGTACCTGGAGCCGGGTGGGGATGGTGGTGGG
GGCCACCTACCCGGAGGCCGTGGCTCGGGTGCGGGAAAGGGCGCCCCACGCCCCCCTCCTCCTCCCCGGCGTGGGGGCCC
AGGGGGGGAGGCCCCTCAAGGGGGAGGGGCTTCTTTTCGCGGCGAGCCGGGCCCTCTACTACCCTGGGGGAAGGCCGGAC
CTAAAGGCCGCCCTGGAGGCGGCGGAGGCCCTCTTGAAGGCTCTGGTAGAGTAG

Upstream 100 bases:

>100_bases
GTGGCCGGAGGTGTTGTTCCAGCCCGCGGTGCTTTCGGCGTTTTGCAGGAGGGCTGGGTTCTCTTGGGCGTTCGGGGCGT
CAACCCCTATAGTGAAGCCC

Downstream 100 bases:

>100_bases
GGGGGATGGACGTCCTGGAGCTTTACCGGAGGACGGGGGCTCTTCTAGAGGGCCACTTCCTCCTGCGTTCGGGGATGCAC
TCCCCCTTCTTTTTGCAGTC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDFLEALSRPPLVLGVDPRPTLHGPEPLAHIRRYTFELLEALAPRLAAAKFQLAFFEALGLEGTALLWELASASRVMGLP
VIFDGKRGDIGSTAEAYARAYLEAFPGSALTVNPYLGLDALKPFFQAASRTGGGVFVLAKTSNPGSGFLQDLLVEEKPLY
LHLAEALEREGEGYREGTWSRVGMVVGATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPGGRPD
LKAALEAAEALLKALVE

Sequences:

>Translated_257_residues
MDFLEALSRPPLVLGVDPRPTLHGPEPLAHIRRYTFELLEALAPRLAAAKFQLAFFEALGLEGTALLWELASASRVMGLP
VIFDGKRGDIGSTAEAYARAYLEAFPGSALTVNPYLGLDALKPFFQAASRTGGGVFVLAKTSNPGSGFLQDLLVEEKPLY
LHLAEALEREGEGYREGTWSRVGMVVGATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPGGRPD
LKAALEAAEALLKALVE
>Mature_257_residues
MDFLEALSRPPLVLGVDPRPTLHGPEPLAHIRRYTFELLEALAPRLAAAKFQLAFFEALGLEGTALLWELASASRVMGLP
VIFDGKRGDIGSTAEAYARAYLEAFPGSALTVNPYLGLDALKPFFQAASRTGGGVFVLAKTSNPGSGFLQDLLVEEKPLY
LHLAEALEREGEGYREGTWSRVGMVVGATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPGGRPD
LKAALEAAEALLKALVE

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 27463; Mature: 27463

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLEALSRPPLVLGVDPRPTLHGPEPLAHIRRYTFELLEALAPRLAAAKFQLAFFEALG
CCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEGTALLWELASASRVMGLPVIFDGKRGDIGSTAEAYARAYLEAFPGSALTVNPYLGLDA
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
LKPFFQAASRTGGGVFVLAKTSNPGSGFLQDLLVEEKPLYLHLAEALEREGEGYREGTWS
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
RVGMVVGATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPGGRPD
HHHHEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCEEECCCCCHH
LKAALEAAEALLKALVE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFLEALSRPPLVLGVDPRPTLHGPEPLAHIRRYTFELLEALAPRLAAAKFQLAFFEALG
CCHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEGTALLWELASASRVMGLPVIFDGKRGDIGSTAEAYARAYLEAFPGSALTVNPYLGLDA
CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHH
LKPFFQAASRTGGGVFVLAKTSNPGSGFLQDLLVEEKPLYLHLAEALEREGEGYREGTWS
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
RVGMVVGATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPGGRPD
HHHHEEECCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCEEECCCCCHH
LKAALEAAEALLKALVE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8787418 [H]