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The map label for this gene is rpmC

Identifier: 55981653

GI number: 55981653

Start: 1586378

End: 1586596

Strand: Reverse

Name: rpmC

Synonym: TTHA1684

Alternate gene names: 55981653

Gene position: 1586596-1586378 (Counterclockwise)

Preceding gene: 55981654

Following gene: 55981652

Centisome position: 85.77

GC content: 59.82

Gene sequence:

>219_bases
ATGAAGCTCAGTGAGGTGAGGAAGCAGCTGGAGGAGGCCCGGAAGCTCTCCCCCGTGGAGCTGGAGAAGCTCGTGCGGGA
GAAGAAGCGGGAGCTCATGGAGCTCCGCTTCCAGGCCTCCATCGGCCAGCTTTCCCAAAACCACAAGATCAGGGACCTCA
AGCGCCAGATCGCCAGGCTCCTTACGGTCTTGAACGAGAAGAGGAGGCAGAATGCCTAA

Upstream 100 bases:

>100_bases
GAGGTCGCCGGGGTCACGGAGGAGCAGGCCATGGAGGCCCTGCGCATCGCGGGCCACAAGCTCCCCATCAAGACCAAGAT
CGTGAGGAGGGACGCCTACG

Downstream 100 bases:

>100_bases
GAAGGTCCTCACCGGGGTGGTGGTCAGCGACAAGATGCAGAAGACCGTCACGGTCTTGGTGGAGCGCCAGTTCCCCCACC
CCCTCTACGGCAAGGTGATC

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA

Sequences:

>Translated_72_residues
MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA
>Mature_72_residues
MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARLLTVLNEKRRQNA

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_THET2 (Q72I12)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_005289.1
- PDB:   1VSA
- PDB:   1VSP
- PDB:   3D5B
- PDB:   3D5D
- PDB:   3F1F
- PDB:   3F1H
- PDB:   3MRZ
- PDB:   3MS1
- PDBsum:   1VSA
- PDBsum:   1VSP
- PDBsum:   3D5B
- PDBsum:   3D5D
- PDBsum:   3F1F
- PDBsum:   3F1H
- PDBsum:   3MRZ
- PDBsum:   3MS1
- ProteinModelPortal:   Q72I12
- SMR:   Q72I12
- STRING:   Q72I12
- GeneID:   2774482
- GenomeReviews:   AE017221_GR
- eggNOG:   NOG140670
- HOGENOM:   HBG244712
- OMA:   KELRAMS
- ProtClustDB:   PRK00306
- BioCyc:   TTHE262724:TT_C1320-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 8650; Mature: 8650

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LTVLNEKRRQNA
HHHHHHHHHCCC
>Mature Secondary Structure
MKLSEVRKQLEEARKLSPVELEKLVREKKRELMELRFQASIGQLSQNHKIRDLKRQIARL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LTVLNEKRRQNA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA