| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is fbpA [H]
Identifier: 55981597
GI number: 55981597
Start: 1541285
End: 1542277
Strand: Direct
Name: fbpA [H]
Synonym: TTHA1628
Alternate gene names: 55981597
Gene position: 1541285-1542277 (Clockwise)
Preceding gene: 55981596
Following gene: 55981598
Centisome position: 83.32
GC content: 68.98
Gene sequence:
>993_bases ATGATGAAGCGCTACCTTTTGACCCTTGCGGCTTTCGCGGCCCTAGGCGCCCTTGCCCAAAGCCCCACGCTCACCATCTA CTCGGGGCGGGGACAGAGCCTGGTGGAACCCTTGGTCAAGCAGTTTGAGGCGGAGACCGGTATCCGGGTCCAGGTCCGCT ACAGCACCGACGCCCAGATCCTCGCCGCCCTCCAGGAGGAGGGGAGCCGTTCCCCCGCCGACCTCTTCTGGGCCAACACC GCCGGGGCCCTGGGCCAGGCCTCGGCCAAGGGGCTTCTCCGCCCCTTGGGGGAGACGCTCCTAGAGAAGCCCATCGCCTT CGTGCCCGCCTCCAGGACCTGGGTCCCCGTGACCGTGCGCCTCAGGGTCCTGGCCTACAACCCGGACCGGATCAAGGCGG AGGAGCTCCCGGAAAGCCTCCTGGACCTCCCCCGCTTCGCCCGGGAGAAGGGGCTCGTGGGCCGGGTGGGCTGGACCCCC ACCTACTCCAGCTTCCAGGACATGGTGGCGGGGATGATCGCCCTCTACGGGGAGGAGAAGACCCGGGAGTGGCTCCTCGC CATGAAGGCCCTCGCCCCCAAGGCCTACCCCTCCAACCCCGCCATGCTGGACGCCATCCGGGCGGGGGAGGTGGACCTGG GCTCCACCAACCACTACTACGTGGTCCGCTTCCGCCGGGCGGGGTACCGCCTGGGGATGCACCACTTCCGTGACGGGGAC GCGGGCAACCTGGCCCTGGTCACGGGGGCGGGCCTCCTCAAGACCAGCAAGAACCTCGCCGCCGCCACCCGCTTCCTCAC CTACCTCCTCTCCCCTCAGGCCCAGCAGTACTTCGTGGGCAACATCGGGGAGTACCCCCTGGTGAAGGGGGTGGCGCTGG ACCCCAACCTCCTCCCCCTGGAGGAGGCCCTGGCGAAAAGCCCCAAGCTGGACCTTGAGAAGCTTCCCCTGGACCGGGCC CTGAGGCTTCTGAGGGAGACCGGGGTCCTCTAG
Upstream 100 bases:
>100_bases TCTAAAACCAATAAATCCGACCGGAATACTTGACATTCCCCCCGCCCCGGGGTACCCTCCTTCCCGGGAGGCGCGCCTCC CGAGGAGAACGGAGGTACCC
Downstream 100 bases:
>100_bases CGGGCCCAAGGGGCGGGGTTTCCCCGCCCCTTCCCCAAACGGCCATGACCCTCTTCCGGCGCGCCACCCTTCCCGGCCTA CTTCCCTTTCTCCTTCCCGC
Product: iron ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Iron(III)-binding periplasmic protein [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MMKRYLLTLAAFAALGALAQSPTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEEGSRSPADLFWANT AGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTP TYSSFQDMVAGMIALYGEEKTREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGD AGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKSPKLDLEKLPLDRA LRLLRETGVL
Sequences:
>Translated_330_residues MMKRYLLTLAAFAALGALAQSPTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEEGSRSPADLFWANT AGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTP TYSSFQDMVAGMIALYGEEKTREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGD AGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKSPKLDLEKLPLDRA LRLLRETGVL >Mature_330_residues MMKRYLLTLAAFAALGALAQSPTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQILAALQEEGSRSPADLFWANT AGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVRLRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTP TYSSFQDMVAGMIALYGEEKTREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGD AGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPLEEALAKSPKLDLEKLPLDRA LRLLRETGVL
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. This protein specifically binds Fe(3+) and is involved in its transmembrane transport [H]
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36152; Mature: 36152
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRYLLTLAAFAALGALAQSPTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQI CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHH LAALQEEGSRSPADLFWANTAGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVR HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEE LRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTPTYSSFQDMVAGMIALYGEEK EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCHH TREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGD HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCCCCEEEEEEECCCCHHCHHHCCCCC AGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPL CCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECEECCCCCCCH EEALAKSPKLDLEKLPLDRALRLLRETGVL HHHHHCCCCCCHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MMKRYLLTLAAFAALGALAQSPTLTIYSGRGQSLVEPLVKQFEAETGIRVQVRYSTDAQI CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHH LAALQEEGSRSPADLFWANTAGALGQASAKGLLRPLGETLLEKPIAFVPASRTWVPVTVR HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEE LRVLAYNPDRIKAEELPESLLDLPRFAREKGLVGRVGWTPTYSSFQDMVAGMIALYGEEK EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCHH TREWLLAMKALAPKAYPSNPAMLDAIRAGEVDLGSTNHYYVVRFRRAGYRLGMHHFRDGD HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCCCCCEEEEEEECCCCHHCHHHCCCCC AGNLALVTGAGLLKTSKNLAAATRFLTYLLSPQAQQYFVGNIGEYPLVKGVALDPNLLPL CCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEECEECCCCCCCH EEALAKSPKLDLEKLPLDRALRLLRETGVL HHHHHCCCCCCHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2404942 [H]