| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hspA [H]
Identifier: 55981590
GI number: 55981590
Start: 1536681
End: 1537151
Strand: Reverse
Name: hspA [H]
Synonym: TTHA1621
Alternate gene names: 55981590
Gene position: 1537151-1536681 (Counterclockwise)
Preceding gene: 55981594
Following gene: 55981587
Centisome position: 83.1
GC content: 69.43
Gene sequence:
>471_bases ATGGCGATGACCCTGGTGCGGAGGGACGCTCGCCCCATGGAGCTCACGCCCTTCCGGACCTGGAGCCCCTTCACCCTGGT GGACGAGGTCAACCGCCTCTTTGAGGAGGCCTTCTCCGACCTCGTCCGGCCCGCCGCGGCCTACGTGGCCCCGGCCGACC TCTACGAGACGGACGAGGCCCTGATCCTGGAGATGGCCGTGCCCGGGATGACCCCTGAGGACCTGGAGGTGAGCCTCGAG GGCAACAAGCTCACCATCCGGGGCCAGGTGAAGCCCGTGGCCGACGAGCGGGTGCGGCGGTACTACCTCCAGGAGATGGC CCACGGCTCCTTCGTCCGCACCTTCACCCTGCCGGTGGAGGTGGACGCCTCCGGGGTGAAGGCGGAGTTCCGGAACGGGA TCCTCCGGCTCACCCTGCCCAAGGTGGCCGAGGCGCGCGCCAGGCGGATCCCCATTGAGGTGGTCCAGTAA
Upstream 100 bases:
>100_bases AGGTTCATGCCCCTGATTATAGAGGGCTCACGGGTAAGTTAATGGCCTCACATCTCTTGACAAAAACAAGCGCATGTGAT ATAAGCGAGGATGGGAGGTG
Downstream 100 bases:
>100_bases GGGCGTGAGGCCTTAACCCCCCTGGGTTCCCCCAGGGGGGGGGCTTACTTTAGGGCCCCGTCCAGCCGCCGCAGGGCCTC TTCCAGCACCTCGGGGTAGG
Product: heat shock protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MAMTLVRRDARPMELTPFRTWSPFTLVDEVNRLFEEAFSDLVRPAAAYVAPADLYETDEALILEMAVPGMTPEDLEVSLE GNKLTIRGQVKPVADERVRRYYLQEMAHGSFVRTFTLPVEVDASGVKAEFRNGILRLTLPKVAEARARRIPIEVVQ
Sequences:
>Translated_156_residues MAMTLVRRDARPMELTPFRTWSPFTLVDEVNRLFEEAFSDLVRPAAAYVAPADLYETDEALILEMAVPGMTPEDLEVSLE GNKLTIRGQVKPVADERVRRYYLQEMAHGSFVRTFTLPVEVDASGVKAEFRNGILRLTLPKVAEARARRIPIEVVQ >Mature_155_residues AMTLVRRDARPMELTPFRTWSPFTLVDEVNRLFEEAFSDLVRPAAAYVAPADLYETDEALILEMAVPGMTPEDLEVSLEG NKLTIRGQVKPVADERVRRYYLQEMAHGSFVRTFTLPVEVDASGVKAEFRNGILRLTLPKVAEARARRIPIEVVQ
Specific function: May stabilize cellular components during stress and spore formation [H]
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small heat shock protein (HSP20) family [H]
Homologues:
None
Paralogues:
None
Copy number: 686 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002068 - InterPro: IPR008978 [H]
Pfam domain/function: PF00011 HSP20 [H]
EC number: NA
Molecular weight: Translated: 17664; Mature: 17532
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMTLVRRDARPMELTPFRTWSPFTLVDEVNRLFEEAFSDLVRPAAAYVAPADLYETDEA CCCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC LILEMAVPGMTPEDLEVSLEGNKLTIRGQVKPVADERVRRYYLQEMAHGSFVRTFTLPVE EEEEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEE VDASGVKAEFRNGILRLTLPKVAEARARRIPIEVVQ ECCCCCHHHHHCCEEEEECHHHHHHHHHCCCEEECC >Mature Secondary Structure AMTLVRRDARPMELTPFRTWSPFTLVDEVNRLFEEAFSDLVRPAAAYVAPADLYETDEA CCEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCC LILEMAVPGMTPEDLEVSLEGNKLTIRGQVKPVADERVRRYYLQEMAHGSFVRTFTLPVE EEEEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEE VDASGVKAEFRNGILRLTLPKVAEARARRIPIEVVQ ECCCCCHHHHHCCEEEEECHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226695; 8423161 [H]