| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55981559
Identifier: 55981559
GI number: 55981559
Start: 1512976
End: 1513401
Strand: Reverse
Name: 55981559
Synonym: TTHA1590
Alternate gene names: NA
Gene position: 1513401-1512976 (Counterclockwise)
Preceding gene: 55981560
Following gene: 55981558
Centisome position: 81.82
GC content: 73.0
Gene sequence:
>426_bases ATGCGGTGGCTCGCCGGCCTCCTCCTCCTCGCCCAGGCGGTCCTGGGCCAGGGGGGGGCCGGCGGGCCGGTGGCTTCTCC GTCAGGAGAATACCTAGGAGAGCGGGCGCTTTTCCGTTGCCTCGAGGTCCTCAAGGGCCTCGAGGTCCAGGCCTTCTACC GGGAGGGTCCGGACCTCCTCGTCCTCCTCGGGCGGGAGCGGCCCCTCCTCGTTTTGGCCCTGGAGGGGGGAAGGCTTTGG CCCCACCCGCGGCCGCCCCGGGGGAGGCCCCTGCCCAAGCGGCCCTTCCCCTTCCTGCGGGAGCTCACCCTGGCCCCCTG GGTGCTGGAGGTGGAGGGGGAGTACCGCTGCTTCGTCCTCCACCGCGGGCGGGTGGTGGGGATCCTCCGCCTGGACCAGG ACCTCCGCCCCCTGCCCCTCTTTTAG
Upstream 100 bases:
>100_bases GAGGCCAAGGCCCGGCTGGACAAGGAGCCCGGAAGGGCCTTCCTCCTCGCCCAGGCGGCGTTGGCCCTGATCTCCGCCGA ACGGGGGTTCTAGGGTAAGG
Downstream 100 bases:
>100_bases GCCGGGCAGAGTGGGTGGGGAGGCGCTTTGGGGCCCCCGCCGCGGGCGGGGGGCTTAGCCTTGGCCCCGGCATGTGCTAA GCTTTTCTCCGTGTGCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRWLAGLLLLAQAVLGQGGAGGPVASPSGEYLGERALFRCLEVLKGLEVQAFYREGPDLLVLLGRERPLLVLALEGGRLW PHPRPPRGRPLPKRPFPFLRELTLAPWVLEVEGEYRCFVLHRGRVVGILRLDQDLRPLPLF
Sequences:
>Translated_141_residues MRWLAGLLLLAQAVLGQGGAGGPVASPSGEYLGERALFRCLEVLKGLEVQAFYREGPDLLVLLGRERPLLVLALEGGRLW PHPRPPRGRPLPKRPFPFLRELTLAPWVLEVEGEYRCFVLHRGRVVGILRLDQDLRPLPLF >Mature_141_residues MRWLAGLLLLAQAVLGQGGAGGPVASPSGEYLGERALFRCLEVLKGLEVQAFYREGPDLLVLLGRERPLLVLALEGGRLW PHPRPPRGRPLPKRPFPFLRELTLAPWVLEVEGEYRCFVLHRGRVVGILRLDQDLRPLPLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15804; Mature: 15804
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLAGLLLLAQAVLGQGGAGGPVASPSGEYLGERALFRCLEVLKGLEVQAFYREGPDLL CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE VLLGRERPLLVLALEGGRLWPHPRPPRGRPLPKRPFPFLRELTLAPWVLEVEGEYRCFVL EEECCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEE HRGRVVGILRLDQDLRPLPLF ECCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MRWLAGLLLLAQAVLGQGGAGGPVASPSGEYLGERALFRCLEVLKGLEVQAFYREGPDLL CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE VLLGRERPLLVLALEGGRLWPHPRPPRGRPLPKRPFPFLRELTLAPWVLEVEGEYRCFVL EEECCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCEEEEEE HRGRVVGILRLDQDLRPLPLF ECCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA