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The map label for this gene is 55981541

Identifier: 55981541

GI number: 55981541

Start: 1496202

End: 1496600

Strand: Reverse

Name: 55981541

Synonym: TTHA1572

Alternate gene names: NA

Gene position: 1496600-1496202 (Counterclockwise)

Preceding gene: 55981542

Following gene: 55981540

Centisome position: 80.91

GC content: 67.42

Gene sequence:

>399_bases
GTGAGGGTCGTCCTGGACATCAACGTCTTGGTGGCGGCCCTGTTGACCCAGGGGGTGGCCGCCCAGGTGGTGGACCTGTG
GTTGGCGGGCAGGTATACCCTCCTCACCGCCGAGGTCCAGTTGCGGGAGCCCCGGCGGGTGCTGCGGGACAAGTTTCCCG
AGCTGCCCCGCGCCAAGGTGGGTAGGCTTGTCAACCTGTTGCGCCGCCAGGCGGAGGTGGTGGCCCGCCCCCGTCCTCCC
GGCCTTTCCCCGGACCCCGACGACGACCTTCTCCTGGGCATCGCCCTGGTGGGAAGGGCGGACTGCTTGGTGACCGGGGA
CAAGAGTCCCCTGCTTTCCCTTAAGGTGAAGGGGTTGCGCATCCTTTCGGTCCGTTCCTTTTTGCGGGAGGTGAGCTGA

Upstream 100 bases:

>100_bases
AGGAGGAGCGGAAAGCCCTGGCGCGGTTGGTGTGGGAGCTTAGGGCCACGGCCGCTTCCCACGGGCTCACCGAGGAAGAG
GTGGCCCGCCGCCTGGAGGG

Downstream 100 bases:

>100_bases
TGGAAGTCCTCCTTCACGGCGACCTCCGCCGCTTCGGCGAGCGGTTCCAGGTGGAGGCGAGGACCCCGAGGGAGGCCCTG
GAGAAGCTGGGGATCCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRVVLDINVLVAALLTQGVAAQVVDLWLAGRYTLLTAEVQLREPRRVLRDKFPELPRAKVGRLVNLLRRQAEVVARPRPP
GLSPDPDDDLLLGIALVGRADCLVTGDKSPLLSLKVKGLRILSVRSFLREVS

Sequences:

>Translated_132_residues
MRVVLDINVLVAALLTQGVAAQVVDLWLAGRYTLLTAEVQLREPRRVLRDKFPELPRAKVGRLVNLLRRQAEVVARPRPP
GLSPDPDDDLLLGIALVGRADCLVTGDKSPLLSLKVKGLRILSVRSFLREVS
>Mature_132_residues
MRVVLDINVLVAALLTQGVAAQVVDLWLAGRYTLLTAEVQLREPRRVLRDKFPELPRAKVGRLVNLLRRQAEVVARPRPP
GLSPDPDDDLLLGIALVGRADCLVTGDKSPLLSLKVKGLRILSVRSFLREVS

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14564; Mature: 14564

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVLDINVLVAALLTQGVAAQVVDLWLAGRYTLLTAEVQLREPRRVLRDKFPELPRAKV
CEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCCCHHHH
GRLVNLLRRQAEVVARPRPPGLSPDPDDDLLLGIALVGRADCLVTGDKSPLLSLKVKGLR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCCH
ILSVRSFLREVS
HHHHHHHHHHCC
>Mature Secondary Structure
MRVVLDINVLVAALLTQGVAAQVVDLWLAGRYTLLTAEVQLREPRRVLRDKFPELPRAKV
CEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCCCHHHH
GRLVNLLRRQAEVVARPRPPGLSPDPDDDLLLGIALVGRADCLVTGDKSPLLSLKVKGLR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCCH
ILSVRSFLREVS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA