| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is hemA [H]
Identifier: 55981475
GI number: 55981475
Start: 1433992
End: 1435164
Strand: Reverse
Name: hemA [H]
Synonym: TTHA1506
Alternate gene names: 55981475
Gene position: 1435164-1433992 (Counterclockwise)
Preceding gene: 55981476
Following gene: 55981474
Centisome position: 77.59
GC content: 71.44
Gene sequence:
>1173_bases ATGGCCTTGCCCCTCTACCTGGTGGGCCTCTCCCACAAGACCGCCCCCCTGGAGGTGCGGGAGCGGGCCGCCTTGGACCC CGTGGTGGCCCTCCCCGCCGCCCTTTCCGCCCTGGGCAAGGGGGTGGTCCTCTCCACCTGCAACCGCACGGAGCTCTACG GGGTGGGAAGCCCCGAGAAGGCCAGGGCCTTCCTCCTCTCAAGGGGGGTGGCCCCCCGGCACCTCTACGTGAAGGAGGGG GTGGAGGCCCTGCGCCACCTCTACCGGGTGGCCGCCGGGCTGGACTCCCTGGTGGTGGGGGAGGCCCAGATCCTGGGCCA GGTGCGGGAGGCCCTCTTCCTGGCCAGGAGGCAGGGCGCCACGGAAAGCCTTCTGGAGAAGGCCTTTCAGTCGGCCATCG CCTTGGGCAAGCGGGCCCGGAGCGAGACGGGCATCGGCATGGGGGCGGTGAGCGTGGCCTACGCCGCCTTGGACCTGGCC CTCGCCGTCTACGGGGACCTTTCCGGGCTTTCCGTGGCCGTGCTGGGGGCGGGGGAGATGGCGGAGCTTTTCCTCACCCA CCTGAAGGCCCACGGGGTGGGGCGGATCCTGGTCGTGAACCGGACGGAGGAAAAGGCCCAGGCCCTGGCGGAGCGCTTTG GCGGCGAGGCCTTTGGCCTTCCCGCCCTTCCCCAGGTCTTGCGCCAGGCGGACCTGGTGGTGGCCTCGGCCGCCGCCCCC CACTACCTGGTGGGCCCCGAGGACCTGCCCAAGCGGGCCAAGCCCCTTTTCCTCATAGACATCGCCCTTCCCCGGAACAT TGACCCCCGGGTGGGGGACCTCCCCCACGCCTACCTCTACAACCTGGACGACCTCAAGCGGGTGGTGGACCGGAACCTAA GGGCCCGCGCGGGGGAGATCCCCAAGGTGGAAGCCCTCATTGAGAAGGCCTTAGGGGACTACATGGAGTGGTACGCGGGC CACCGGGTGCGGGAGGCCATCCGGGCCCTCGAGGCCTGGGCCCGGGTCCAGGCGGCCAAGGCCCAGCCGGAGGCCGGGCC TGTGGAGCTGGAAAAGGCGGCGGGGCGTCTGGCCCACCCCTTCATCCTGGGGCTGAAGCGCCGCGCCCTGGACCGGGTGG GGGGGCCTCCCTGCCCGGAGGACTGCCTCCTCTACCGGCTTTCCCGGACATGA
Upstream 100 bases:
>100_bases GGAAAGCCCGGGGCTAGAAGGGCTTTTTGCCGCCCTTCTCCGGGCCCTCGGGCGGTAGGGCAAACGTCCCTACCCCGGTG GCCTATACTCAGGGAAGCGT
Downstream 100 bases:
>100_bases CCCTGGCCCTGGCCTTTCTCGGGGTGGTGGGGGTGGCCTTTGGGGTCTTTCTCCCCGCGGGGCTTTCCTGGGGCGGGGCC TTCCTCCTCCTTGGGGCCCT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MALPLYLVGLSHKTAPLEVRERAALDPVVALPAALSALGKGVVLSTCNRTELYGVGSPEKARAFLLSRGVAPRHLYVKEG VEALRHLYRVAAGLDSLVVGEAQILGQVREALFLARRQGATESLLEKAFQSAIALGKRARSETGIGMGAVSVAYAALDLA LAVYGDLSGLSVAVLGAGEMAELFLTHLKAHGVGRILVVNRTEEKAQALAERFGGEAFGLPALPQVLRQADLVVASAAAP HYLVGPEDLPKRAKPLFLIDIALPRNIDPRVGDLPHAYLYNLDDLKRVVDRNLRARAGEIPKVEALIEKALGDYMEWYAG HRVREAIRALEAWARVQAAKAQPEAGPVELEKAAGRLAHPFILGLKRRALDRVGGPPCPEDCLLYRLSRT
Sequences:
>Translated_390_residues MALPLYLVGLSHKTAPLEVRERAALDPVVALPAALSALGKGVVLSTCNRTELYGVGSPEKARAFLLSRGVAPRHLYVKEG VEALRHLYRVAAGLDSLVVGEAQILGQVREALFLARRQGATESLLEKAFQSAIALGKRARSETGIGMGAVSVAYAALDLA LAVYGDLSGLSVAVLGAGEMAELFLTHLKAHGVGRILVVNRTEEKAQALAERFGGEAFGLPALPQVLRQADLVVASAAAP HYLVGPEDLPKRAKPLFLIDIALPRNIDPRVGDLPHAYLYNLDDLKRVVDRNLRARAGEIPKVEALIEKALGDYMEWYAG HRVREAIRALEAWARVQAAKAQPEAGPVELEKAAGRLAHPFILGLKRRALDRVGGPPCPEDCLLYRLSRT >Mature_389_residues ALPLYLVGLSHKTAPLEVRERAALDPVVALPAALSALGKGVVLSTCNRTELYGVGSPEKARAFLLSRGVAPRHLYVKEGV EALRHLYRVAAGLDSLVVGEAQILGQVREALFLARRQGATESLLEKAFQSAIALGKRARSETGIGMGAVSVAYAALDLAL AVYGDLSGLSVAVLGAGEMAELFLTHLKAHGVGRILVVNRTEEKAQALAERFGGEAFGLPALPQVLRQADLVVASAAAPH YLVGPEDLPKRAKPLFLIDIALPRNIDPRVGDLPHAYLYNLDDLKRVVDRNLRARAGEIPKVEALIEKALGDYMEWYAGH RVREAIRALEAWARVQAAKAQPEAGPVELEKAAGRLAHPFILGLKRRALDRVGGPPCPEDCLLYRLSRT
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=363, Percent_Identity=38.2920110192837, Blast_Score=232, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 [H]
Pfam domain/function: PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 41937; Mature: 41806
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00747 GLUTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPLYLVGLSHKTAPLEVRERAALDPVVALPAALSALGKGVVLSTCNRTELYGVGSPEK CCCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHH ARAFLLSRGVAPRHLYVKEGVEALRHLYRVAAGLDSLVVGEAQILGQVREALFLARRQGA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC TESLLEKAFQSAIALGKRARSETGIGMGAVSVAYAALDLALAVYGDLSGLSVAVLGAGEM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH AELFLTHLKAHGVGRILVVNRTEEKAQALAERFGGEAFGLPALPQVLRQADLVVASAAAP HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC HYLVGPEDLPKRAKPLFLIDIALPRNIDPRVGDLPHAYLYNLDDLKRVVDRNLRARAGEI CEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC PKVEALIEKALGDYMEWYAGHRVREAIRALEAWARVQAAKAQPEAGPVELEKAAGRLAHP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHH FILGLKRRALDRVGGPPCPEDCLLYRLSRT HHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure ALPLYLVGLSHKTAPLEVRERAALDPVVALPAALSALGKGVVLSTCNRTELYGVGSPEK CCCEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCHH ARAFLLSRGVAPRHLYVKEGVEALRHLYRVAAGLDSLVVGEAQILGQVREALFLARRQGA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC TESLLEKAFQSAIALGKRARSETGIGMGAVSVAYAALDLALAVYGDLSGLSVAVLGAGEM HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH AELFLTHLKAHGVGRILVVNRTEEKAQALAERFGGEAFGLPALPQVLRQADLVVASAAAP HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC HYLVGPEDLPKRAKPLFLIDIALPRNIDPRVGDLPHAYLYNLDDLKRVVDRNLRARAGEI CEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCC PKVEALIEKALGDYMEWYAGHRVREAIRALEAWARVQAAKAQPEAGPVELEKAAGRLAHP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHH FILGLKRRALDRVGGPPCPEDCLLYRLSRT HHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA