Click here to switch to the map view.

The map label for this gene is 55981466

Identifier: 55981466

GI number: 55981466

Start: 1424557

End: 1425003

Strand: Reverse

Name: 55981466

Synonym: TTHA1497

Alternate gene names: NA

Gene position: 1425003-1424557 (Counterclockwise)

Preceding gene: 55981473

Following gene: 55981465

Centisome position: 77.04

GC content: 70.69

Gene sequence:

>447_bases
ATGGCGCCTCCTTCGGTGCCCATAGTATACGCCGGGGGGCGGGGCGGTTGTCCCGGCGGGTATCATGGCCTTGTGCTCTA
CGTGCCTCGAGGCCTTCTGGAGGAGACCCGGGCCCACCTCCTGAGGGAGGCCCCCAAGGAGGGGGTGGGGCTCTGGGCGG
GCAGGCGCGAGGTGGAGCGGGTCATCCCCCTGCCCAACGTCCACCCGAGCCCCCTCACCGCCTACCTGGCGGACCCCCTG
GCCCTCCTCAAGGCCCTCAAGGCGCTTGAGCGGGAGGGGCTTTCCCTGCTTGCCATCTACCACTCCCACCCCAAAGGCCC
CGCCCTTCCGAGCCCGAGGGACATCAAGGAGGCCCGCTGGCGGGTGCCCTACGTCATCTTCGGCACGGACGGGGTCCGGG
CCTTCCTCCTCCCCGAGGGGCAGGAGGTGGCCCTAGTGGTGCTCTAG

Upstream 100 bases:

>100_bases
CCGGCCCCGGCGCTCCTTGGCCCCGGTCTTGTAAAGTAGGGCCTCCGTGAGGGTGGTTTTCCCGCTTCCCGCGTGCCCCA
CCAGGGCGACGGTTCGGATC

Downstream 100 bases:

>100_bases
GGCGCATAAACTTCCCAAGCCCCGCATGGACGTTTCTGCTACCATGCCCCCCATGGAACGCGTGGCCGTGGTGGGCGTGC
CCATGGACCTGGGGGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Mov34/MPN/PAD-1 Family Protein; Metal-Dependent Protease Of PAD1/JAB1 Superfamily

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAPPSVPIVYAGGRGGCPGGYHGLVLYVPRGLLEETRAHLLREAPKEGVGLWAGRREVERVIPLPNVHPSPLTAYLADPL
ALLKALKALEREGLSLLAIYHSHPKGPALPSPRDIKEARWRVPYVIFGTDGVRAFLLPEGQEVALVVL

Sequences:

>Translated_148_residues
MAPPSVPIVYAGGRGGCPGGYHGLVLYVPRGLLEETRAHLLREAPKEGVGLWAGRREVERVIPLPNVHPSPLTAYLADPL
ALLKALKALEREGLSLLAIYHSHPKGPALPSPRDIKEARWRVPYVIFGTDGVRAFLLPEGQEVALVVL
>Mature_147_residues
APPSVPIVYAGGRGGCPGGYHGLVLYVPRGLLEETRAHLLREAPKEGVGLWAGRREVERVIPLPNVHPSPLTAYLADPLA
LLKALKALEREGLSLLAIYHSHPKGPALPSPRDIKEARWRVPYVIFGTDGVRAFLLPEGQEVALVVL

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16032; Mature: 15901

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPSVPIVYAGGRGGCPGGYHGLVLYVPRGLLEETRAHLLREAPKEGVGLWAGRREVER
CCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCHHHHHH
VIPLPNVHPSPLTAYLADPLALLKALKALEREGLSLLAIYHSHPKGPALPSPRDIKEARW
HCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHC
RVPYVIFGTDGVRAFLLPEGQEVALVVL
CCCEEEECCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
APPSVPIVYAGGRGGCPGGYHGLVLYVPRGLLEETRAHLLREAPKEGVGLWAGRREVER
CCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEECCCHHHHHH
VIPLPNVHPSPLTAYLADPLALLKALKALEREGLSLLAIYHSHPKGPALPSPRDIKEARW
HCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHC
RVPYVIFGTDGVRAFLLPEGQEVALVVL
CCCEEEECCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA