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The map label for this gene is 55981447

Identifier: 55981447

GI number: 55981447

Start: 1407804

End: 1408262

Strand: Reverse

Name: 55981447

Synonym: TTHA1478

Alternate gene names: NA

Gene position: 1408262-1407804 (Counterclockwise)

Preceding gene: 55981448

Following gene: 55981446

Centisome position: 76.13

GC content: 64.71

Gene sequence:

>459_bases
ATGAACGGGCGGAACGGGTCTTTAACCTCCTCCTCTAGCGTGAGCCAGGACCTTTTGCTCCAAGCCTACCGGAGGGCCAT
CCGCCTCGTGTTCAACCTCGTGGTGGTGGCCCTCCTCGTGGGCCTTTTCGTGGGGACCTGGCGCACCTTCTTGGAGCTCG
GCCTCACCCTCACGGAGCCCACGGTGCGCCTGGGGCTCAAGGAGCTTATCACCAACGTTCTCTCCCTGGTGATCGTCTTG
GAGCTCGTCCGGGCCTTCGTGGAGTACTTTGAGGTGGAACGGGTGCGCCTGGAGATCCTCCTGGAGATCGGGATCGCCCT
GGCCCTGCGGGAGCTGCTTCTCCTCCTGTATGAGGCGCGGCTTTCCGGTATGGACGTCTTCTTCTGGGGCCTGGGGATCC
TGGCCCTCGCGGCCGGGCGCACCCTGGCGGTGCAGTTCTCCCCGAGGAGGGCAGGATGA

Upstream 100 bases:

>100_bases
CGGAACCTCCTTCCCGAGCTCGCCGGGGCCCTGGTGGTGGCCTACGCCCGGGTGCTCAAGGAGCTGGACCCCGCCCTCAA
GAACCCCCAGACGGAGCACC

Downstream 100 bases:

>100_bases
AGGTAGAGGAAGTGGTTCTTCCCGGCGTGGGGCGCAAGTACACCATCACGGTGAAGAGCGGGGACCGGATCGTCATCGTG
GTGCATAGCTCCGGCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNGRNGSLTSSSSVSQDLLLQAYRRAIRLVFNLVVVALLVGLFVGTWRTFLELGLTLTEPTVRLGLKELITNVLSLVIVL
ELVRAFVEYFEVERVRLEILLEIGIALALRELLLLLYEARLSGMDVFFWGLGILALAAGRTLAVQFSPRRAG

Sequences:

>Translated_152_residues
MNGRNGSLTSSSSVSQDLLLQAYRRAIRLVFNLVVVALLVGLFVGTWRTFLELGLTLTEPTVRLGLKELITNVLSLVIVL
ELVRAFVEYFEVERVRLEILLEIGIALALRELLLLLYEARLSGMDVFFWGLGILALAAGRTLAVQFSPRRAG
>Mature_152_residues
MNGRNGSLTSSSSVSQDLLLQAYRRAIRLVFNLVVVALLVGLFVGTWRTFLELGLTLTEPTVRLGLKELITNVLSLVIVL
ELVRAFVEYFEVERVRLEILLEIGIALALRELLLLLYEARLSGMDVFFWGLGILALAAGRTLAVQFSPRRAG

Specific function: Unknown

COG id: COG3431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16888; Mature: 16888

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRNGSLTSSSSVSQDLLLQAYRRAIRLVFNLVVVALLVGLFVGTWRTFLELGLTLTEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVRLGLKELITNVLSLVIVLELVRAFVEYFEVERVRLEILLEIGIALALRELLLLLYEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGMDVFFWGLGILALAAGRTLAVQFSPRRAG
HCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
>Mature Secondary Structure
MNGRNGSLTSSSSVSQDLLLQAYRRAIRLVFNLVVVALLVGLFVGTWRTFLELGLTLTEP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
TVRLGLKELITNVLSLVIVLELVRAFVEYFEVERVRLEILLEIGIALALRELLLLLYEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSGMDVFFWGLGILALAAGRTLAVQFSPRRAG
HCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA