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The map label for this gene is 55981425

Identifier: 55981425

GI number: 55981425

Start: 1383862

End: 1384227

Strand: Reverse

Name: 55981425

Synonym: TTHA1456

Alternate gene names: NA

Gene position: 1384227-1383862 (Counterclockwise)

Preceding gene: 55981430

Following gene: 55981424

Centisome position: 74.83

GC content: 61.48

Gene sequence:

>366_bases
ATGTACAGGGGAAGCGAAGGGCAGTGGGCGTTCTACCTGCACCGCATCTCGGGGATCGGGATCCTGGTCTTCCTCGTCCT
TCACGTCCTCAACATCGCCAGCGCCATGTGGGGGCCCGAGGTGTCCAACGCCTTCATGAAGTTCTACCACCAACCCGTGT
TCCAGCTCGGCCTCCTCGTCCTGATCGCCGGGGTGCTGTACCACGGGTTCAACGGCCTCCGCATCATCCTCATGGACTTC
ACTTCCTGGGGCGTGCGCTACCAGAAGCAGCTTTGGTACGCGGCCTGGGTCCTTTTCGTGGTCTTCTACCTGCCCTTCCT
CGTCAAGATCGGGGGCGGGATCCTCGGAGGGAGCCATGGCGATTAA

Upstream 100 bases:

>100_bases
CGCTTTATACCCCCCTCCTGTAACAGGGGGGCGGGTGTGCCGGAGGATACCGAGGGGGATGAGGAAAAAGTGATATGATG
GCCTCCGGCTGGAGGGAAGC

Downstream 100 bases:

>100_bases
GTCCAAAAGGTACCAGGAGGCCCGGCTCGAGGCCAGCACCAACCTGGAGCTCTACTGGTGGGTCTTCATGCGCGTCTCCG
GGGTGGTGCTCGTCTTCTTG

Product: succinate dehydrogenase, cytochrome subunit

Products: NA

Alternate protein names: Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Membrane Subunit; Succinate Dehydrogenase Cytochrome Subunit; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase SdhC; Succinate Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MYRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLVLIAGVLYHGFNGLRIILMDF
TSWGVRYQKQLWYAAWVLFVVFYLPFLVKIGGGILGGSHGD

Sequences:

>Translated_121_residues
MYRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLVLIAGVLYHGFNGLRIILMDF
TSWGVRYQKQLWYAAWVLFVVFYLPFLVKIGGGILGGSHGD
>Mature_121_residues
MYRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLVLIAGVLYHGFNGLRIILMDF
TSWGVRYQKQLWYAAWVLFVVFYLPFLVKIGGGILGGSHGD

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13711; Mature: 13711

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHH
LIAGVLYHGFNGLRIILMDFTSWGVRYQKQLWYAAWVLFVVFYLPFLVKIGGGILGGSHG
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
D
C
>Mature Secondary Structure
MYRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHH
LIAGVLYHGFNGLRIILMDFTSWGVRYQKQLWYAAWVLFVVFYLPFLVKIGGGILGGSHG
HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA